Candidatus Thiothrix sulfatifontis: L3K52_16900
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Entry
L3K52_16900 CDS
T09924
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
L3K52_16900 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsj02000
]
L3K52_16900 (msbA)
Enzymes [BR:
tsj01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
L3K52_16900 (msbA)
Transporters [BR:
tsj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
L3K52_16900 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
DEAD
AAA_29
AAA
NACHT
ABC_ATPase
RsgA_GTPase
AAA_24
Pox_A32
DUF3584
MMR_HSR1
DUF2674
TsaE
MobB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
UOG91843
LinkDB
All DBs
Position
complement(3378462..3380213)
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AA seq
583 aa
AA seq
DB search
MTTPRTTGWQVYRRLIGYSLGYWHYLALATVGLVISAMTQPFFAWGLQPLLDKAIMQRDP
DTIMWLPVGILGLFLLRGAAMFLSGYYIGMIGRQVTKTLRNQVFNQLLRMPVSFFENTQA
GKLLAYVSYYIDQVANASIRGMTTLVQDSVTILGLLGLMLVYSWQLTLGILVIVPVIALI
VVYATRRLRRLSHKVQDSVGDVTQIANEMIRGYKVVRIFNGEPYEERRFGAANEQNIDLH
MKRMVTELLSTPLVQFMVAVALAAIVFMATRESTLETLSPGTFISFIMAMILMLTPIRNL
TQLNAQLQTAIAAGEGIFELLDSPTEADTGKQALTQCRGEVLFHNVSFRYPNTDKWVLRD
IDLRVNPGEKIALVGKSGSGKTTLVNLLPRFYDVQQGEILLDGVRVAELSLYNLRSHIAY
VGQDVVLFNDSVRNNIAYGDMRGMDDAQIRAAAEAAFALEFIEKLPQGFDTLIGDNGVML
SGGQRQRLSIARAILSNAPVLILDEATSALDTESERHIQAALDNLLSNRTTFMIAHRLST
IENADRILVMQDGAIIESGKHGELLALNGQYARLHALQFHDDT
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaccacgcacgacgggctggcaggtttatcgacggctgattggctattcgttg
ggctactggcattacttggcgctggcaacggtgggcttggtgatcagcgcgatgacgcag
ccattttttgcgtgggggctgcaacctttgctggacaaggcaattatgcaacgtgacccc
gataccattatgtggttgccagtggggattctggggctgtttttgttgcgtggtgcggcg
atgtttttgtcggggtattacatcggcatgatcgggcggcaagtcactaaaactttgcgc
aatcaggtgtttaaccagttattgcggatgccggtcagcttttttgagaatacccaagcg
ggcaaattattggcttacgtcagttattacattgatcaggtggcgaatgccagtattcgc
ggcatgacgaccctggtgcaagattcggtcactattctcggcttgttgggcttaatgttg
gtgtatagctggcaattaaccttgggtatcttggtgattgtgccggtgattgcgctgatt
gtggtgtacgccacgcgccgtttgcgccgtttgagccataaagtgcaggattcggtgggg
gatgtgacccaaattgctaatgaaatgatccgtggttacaaggttgtgcgaattttcaac
ggcgaaccgtatgaagaacgccgcttcggggctgccaatgagcagaacattgacctgcac
atgaaacgcatggtgacggaattgctcagtacgcccttggtgcaattcatggtggcagtg
gcactcgccgcgattgtcttcatggcgacccgtgaatcgacgctggaaaccttgtcgccg
ggtacgtttatctccttcattatggcgatgattctgatgctcacccctatccgcaatttg
acgcagttgaatgcgcaattgcagaccgcgattgcggcgggtgagggcatttttgagttg
ttggatagccccaccgaagccgatactggcaagcaagcgctgactcaatgccggggcgaa
gtgctgtttcataacgtttcattccgttacccgaacaccgataagtgggtgttgcgtgac
attgatttgcgcgtcaaccccggtgaaaaaattgccttggtgggcaagtcaggcagtggc
aaaaccacgctggtgaacttattgccgcgtttttacgatgtgcaacagggcgaaatcttg
ctcgatggggtgcgcgtagccgagttgagtttgtacaacttgcgcagtcatattgcgtat
gttgggcaggacgtggtgctgtttaacgatagtgtgcggaataatattgcttacggcgat
atgcgtggcatggatgatgcgcaaattcgtgccgccgctgaagccgcttttgcgttggaa
ttcatcgaaaagttgccgcagggttttgatacgctgattggcgacaatggggtgatgtta
tccggtgggcaacgccaacgcttgtcgattgcgcgggcgattctctcgaatgcgccggtg
ttgattttggatgaggcaacgtcggcgttggatactgaatccgagcgccatatccaagcg
gcgttggataatttgctcagtaaccgtaccacattcatgattgcgcaccgtttgtcgacg
attgagaatgcggatcgcattttggtgatgcaagacggggcgatcatcgaatccggcaag
catggcgaattgctggcgctgaatgggcagtatgcacgcttgcacgcgctgcaatttcac
gatgacacttga
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