Candidatus Thiothrix sulfatifontis: L3K52_16960
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Entry
L3K52_16960 CDS
T09924
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
tsj
Candidatus Thiothrix sulfatifontis
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsj02000
]
L3K52_16960
01504 Antimicrobial resistance genes [BR:
tsj01504
]
L3K52_16960
Transporters [BR:
tsj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
L3K52_16960
Antimicrobial resistance genes [BR:
tsj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
L3K52_16960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
DUF6476
Motif
Other DBs
NCBI-ProteinID:
UOG91855
LinkDB
All DBs
Position
3391633..3394653
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AA seq
1006 aa
AA seq
DB search
MSSFNLSAWALRHRSFVLYLMVLTLGLGIFGYTKLGQSEDPPFTFKVMLVQAYWSGATAP
EIESQVTERIEKVILETAHVDIVRSFSRPGETNIFVIAKDDAPSAAMPDMFYDIRKRVND
MRHTLPQGVVGPLFNDEFGETYGNIFALTGDGFSFAQLRDAADGIRKELLLVKDVAKILS
IGEQEERVTITLANSKLANLGFSVQQLVDVLQAQNAIAAVGAYNTATDRIYVRPAGAFSD
LEDIRNLPITLGNRTLRLHEVAEVTRGYADPPHSTFRYQGQAALGIGISMRKGGDIIALG
KSLDAALVRIESQLPVGMALHRVNDQPTAVTRSINEFLKVVAEAVIIVLTVSFLSLGMRA
GAVVALSIPLVLAATFFVMHLFGIGLHKISLGSLVLALGLLVDDAIIAIEVMLVKMEAGW
DRVKAASFAYTTTAFPMLTGTLVTAAGFLPIATAQSSVGEYTRSIFEVVTIALVISWFVA
VIVIPYLGYKLLPERQHQHHESKLATRFYRGFRGLIKACVAYPLIVIVLTVATFAGSIFM
FQFVQQQFFPDSTRMELVVDLKLPEGSSLQATEAETRKLEQYLDTQTEHIENFAAYVGNG
APRFYLPLDQQLPSPSFAQFVITTKSIADREALRSKLIDLLDNSPMFGLARGRVIRLENG
PPVGYPVQFRVSGEDLWQLRELGEQVATVMRANPHLVNVHLDWNERSKAIRLKLDTAKAI
SLGVTQSALSQLLQSTLSGTPIGEFREQDQTIPILLRGTEGERDLLSRLAGLNVPTNTGN
TVPLSQLATIDYVQEEGILWHRNRTRTITVRGDIYSKIQAPTVTTEVEARLGEIRANLPL
GYKLEIGGAVEESAKGNESIGAGFPLFIVVVLTLLMIQLQSFQRVIMVVLTAPFGLIGVA
LFLLLFDRPFGFVAMLGTIALSGMIMRNSVILLDQIERNIDAGFVPREAVIEAAVVRFRP
IMLTALAAILAMIPLSESVFFGPMAIAIMGGLLVATVLTLLFLPAV
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttcaacctttcggcatgggcgctacgccaccgtagcttcgtgctctacctg
atggtgctcaccttagggctgggcattttcggctacaccaaattagggcaatcggaagac
ccgccgttcacctttaaagtcatgctggtgcaagcctactggtcgggtgccaccgcacca
gaaatcgagtcacaagttaccgaacgcatcgaaaaagtcattctcgaaaccgcgcacgtc
gatattgtgcgcagcttttcccgccccggcgaaaccaatatctttgtgattgccaaagat
gatgcgccctctgccgccatgcccgatatgttttacgacattcgcaaacgggtgaatgac
atgcgccataccctgccgcaaggcgtggtggggccgttattcaacgatgaattcggggaa
acttacggcaatatctttgccctgaccggcgacggtttcagctttgcgcaattacgcgac
gcagcggatggcattcgcaaagaactgctattggtcaaagacgtggcaaaaatcctcagc
attggcgagcaagaagagcgcgtcaccatcacccttgctaacagcaaactggcaaacctc
ggttttagcgtgcaacaactggtcgatgtgctgcaagcgcaaaacgccatcgctgccgtt
ggcgcttacaatacggcaaccgaccgcatttacgtgcgccccgccggtgccttcagcgac
cttgaagacattcgcaatttaccaatcacccttggcaatcgcaccctgcgcttgcatgaa
gtcgccgaagtcacacgcggctatgccgacccaccccattccaccttccgctatcaaggg
caagcagccttgggaattgggatttcgatgcgcaaaggtggcgacattattgcactgggg
aaatcgctggatgccgcactggtacgtatcgaaagccaattgccggtgggcatggcattg
catcgcgtcaacgaccagcccacggcggtgacacgctccatcaacgaattcctcaaagtg
gtagcggaagccgtcattatcgtgctgaccgtcagctttttgagcttgggaatgcgagcg
ggggcagtcgtggcactttcgattccgttggtattggcagcgactttttttgtcatgcac
ttattcgggattggcttgcacaaaatttcattggggtcgctggtactcgcgctgggtttg
ctggtggatgatgcgattattgccatcgaagtcatgctggtgaaaatggaagcaggttgg
gatcgggtgaaagccgccagctttgcctacaccacaactgcgtttccgatgttgacgggt
accttagtcactgccgccgggttcttaccgattgccaccgcgcaatcttccgtgggggaa
tacacccgttcgatttttgaagtggtcacgattgctttggtgatttcgtggtttgttgcg
gtgatcgtgattccgtatttggggtataagttgttgccagaaagacaacaccagcatcac
gaatccaaacttgccacgcgcttctatcgcggatttcgcggcttgatcaaagcctgtgtc
gcctacccattgatcgttattgtgctgacggtggcgacctttgccgggtcaattttcatg
tttcagtttgtgcagcaacaatttttccccgattccacccgcatggaattggtggtggat
ttgaaattgcccgaaggttcttcgctgcaagccaccgaagctgaaacccgcaagctggag
caatacctcgacacccaaacggaacacatcgaaaactttgcagcgtatgtcggcaatggc
gcaccgcgtttctacctgcccttagaccaacaactgccctcccccagttttgcacaattc
gtgattaccaccaaaagcatcgccgaccgcgaagccttgcgcagcaaactcattgacctg
ttggacaatagccccatgtttggcttggctcgcgggcgggtgattcgtctggaaaatggc
ccgccggtcggttaccccgtgcaattccgtgtatcgggtgaagatttgtggcaattacgc
gaactcggcgagcaagtcgccaccgtcatgcgtgccaacccgcatttggtgaatgtgcat
ctcgactggaacgaacgcagcaaagcgattcgcctgaaactcgataccgccaaagccatc
agccttggggtcacgcaatccgcgctctcgcaactgctgcaaagcaccttgagcggcaca
ccgattggcgaattccgcgagcaagatcaaaccatcccgattctgttgcgcggaacggaa
ggcgaacgtgatttgctctcgcgccttgccgggttgaatgtaccgaccaacaccggcaac
accgttcccctctcacaactggcaaccatcgactacgtgcaggaagaaggcattctctgg
catcgcaaccgcacccgaaccatcacggtgcgcggtgatatttacagcaagattcaagca
ccaaccgtgacaacagaagttgaagcgcgtttgggtgaaattcgcgccaacttgccactg
ggctacaagctggaaatcggcggcgcggtagaagaaagtgccaaaggcaacgaatccatc
ggcgcgggtttcccgctcttcatcgtggtagtgctcacgctgctaatgattcaattacaa
agtttccagcgcgtcattatggtggtgttgacagcaccgtttggcttgattggggttgcg
ttgtttttactgctgtttgatcgcccgttcgggtttgttgccatgttggggacaattgcg
ctttccggcatgattatgcgcaactcggtgattttactggatcaaatcgagcgcaatatt
gacgcggggtttgtgccgcgtgaagccgtaattgaagcggcggtagtgcgtttccgcccc
attatgctcaccgccctcgccgcgattttggcgatgattcccttgtcggaaagcgttttc
tttgggccaatggcgattgcgattatgggcggcttattggtggcgacggtgctaacgctg
ctgtttttaccagcggtgtaa
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