Treponema socranskii subsp. buccale: HRI97_02575
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Entry
HRI97_02575 CDS
T08383
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk03420
Nucleotide excision repair
tsk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HRI97_02575
03430 Mismatch repair
HRI97_02575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsk03400
]
HRI97_02575
Enzymes [BR:
tsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HRI97_02575
DNA repair and recombination proteins [BR:
tsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRI97_02575
MMR (mismatch excision repair)
Other MMR factors
HRI97_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
DEAD
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
UTD02029
LinkDB
All DBs
Position
complement(575237..577252)
Genome browser
AA seq
671 aa
AA seq
DB search
MPELDIHALKTELNPEQLRAVTTITGPILIIAGAGSGKTRVITYRIAHMLDEGIPQSAIL
ALTFTNKAAREMEERVKSLTGKKLQNLTVSTFHAFGVRILRQDIAKLGWRENFSIYDETD
KASLIKESARELQFTSDALDLYKIANLFSNIKTGRKNWESANDMYRALYESYEQGLKLYN
AVDFDDLIMLPIRLFREHPDVLAKYRSRYTYIMVDEFQDTSRQQYELMRLLADKNIAVVG
DDDQSIYSWRGADYQNIVQFEKDFPGVKEIRLEQNYRSTETILSAANGVISHNTNRKDKK
LWSGNGSGKPIELFMPENESAEADFIAESIQGIAMEERRTYDDFGILMRANSQSRAIEEA
LLQANIPYTMSGGTSFFERLEIKDIVSYLRVAANQSDDINLLRIINTPRRGIGRSTISAI
NETAKQNASTLWDAIRYLQKDPAGALSDSAKKSLGEFIDTIEGARAKLFGGRGLANKVRE
LIDEVQYRDYIIGEFQKNEKAVRFKLQNIETLLMSIETWENNPDNFDPSLFNYLNRITLL
SRDDIEDDDGKGKVNLMTIHASKGLEFPVVFIAGAEEGLMPHARSVEETDGDVEEERRLF
YVAITRARDKLLITSCQKRRRMQATVECTPSRFLEEIPENLVEYHEAKKAEPVSEDKAHD
YFADMLKKLKS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactcgacatacatgcattgaaaacggaactcaatcccgaacagctgcgcgcc
gtcacgacgataacaggtcctattttgattatcgccggagcgggaagcggcaaaacaaga
gtcatcacgtatcgcattgcgcacatgctcgatgaaggcattccgcaaagcgcgatcctt
gcgctgacctttacgaataaagccgcgcgcgaaatggaagagcgtgtcaaatcgctgacg
ggcaaaaagctgcaaaacctcacggtgtccacgtttcacgcattcggcgtgcgcattctc
agacaggacatcgccaaactgggctggcgggaaaatttttcgatttacgacgaaaccgac
aaagcctccctcatcaaagaaagcgcgcgggaactgcagttcacatccgacgcgctcgac
ttatacaaaatcgcaaaccttttttcaaacataaaaaccgggcgcaaaaattgggaaagc
gcaaacgatatgtaccgagcgctctacgaatcgtacgagcagggattgaagctgtacaat
gcggtcgacttcgacgatctcatcatgctgccgatccgcctgttccgtgaacaccccgac
gtgcttgcaaaataccgttctcgctacacgtacatcatggtcgacgaatttcaggacacg
agccggcagcagtacgagctcatgcgtctccttgccgataaaaacatcgcggtcgtcgga
gacgacgatcagtcgatctacagctggagaggcgccgattatcaaaacatcgtacagttc
gaaaaagattttccgggtgtgaaggaaatccgcctcgagcaaaactaccgttcgaccgaa
accattttaagcgcggcgaacggcgtcatatcgcacaacacgaaccgcaaagacaaaaaa
ctgtggagcggcaacggttcgggaaagcctatcgaactgtttatgccggaaaacgaaagc
gccgaagcggattttatcgccgaaagcattcaaggcatcgcgatggaagagaggcgtaca
tacgacgatttcggcatactcatgcgcgcaaactcgcagagccgcgcgatcgaagaagcc
ctgcttcaagcgaacattccctatacgatgagcggcggtacgagttttttcgaacggctc
gaaataaaagatatcgtaagctatctgcgcgtcgcggcaaatcaaagcgacgacatcaat
ctgcttcggatcatcaatacgccgcggcggggcatcgggaggagtacgatttcggcgata
aacgaaacggcaaagcaaaatgcgagcacgctgtgggatgcgatccgctatctgcaaaaa
gatcccgcaggagcgctttccgattcggcaaaaaaatcgctcggagaatttatcgatacg
atcgaaggcgcaagggcgaagcttttcggcggtcgggggcttgcaaacaaagtgcgcgaa
ctcatcgacgaggtacagtaccgcgactacatcatcggcgaatttcaaaaaaacgaaaaa
gcggtgcgctttaaattgcagaatatcgaaacgctgctcatgtcgatcgaaacgtgggaa
aacaatcccgacaatttcgatccgagtctgttcaattatttgaaccgcattacgctcttg
agccgcgacgacatcgaagacgacgacggcaaaggcaaagtcaatttgatgacgatccac
gcgtcgaaggggctcgaatttcccgtcgtgtttatcgccggtgcggaagaagggcttatg
ccgcacgcgcgttccgtcgaagaaacggacggagacgtcgaagaagagaggcgccttttt
tacgtcgcgatcacgcgcgcacgggacaaattattgattacgtcgtgccaaaagcggagg
cgcatgcaggcgacggtcgaatgcacgccgtcgcgttttcttgaagagataccggaaaac
ctcgtcgaatatcacgaagcgaaaaaagcggagccggtgagcgaagataaagcacacgat
tattttgccgacatgctgaaaaaactcaaaagctga
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