Treponema socranskii subsp. buccale: HRI97_03480
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Entry
HRI97_03480 CDS
T08383
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk03030
DNA replication
tsk03410
Base excision repair
tsk03420
Nucleotide excision repair
tsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRI97_03480 (polA)
03410 Base excision repair
HRI97_03480 (polA)
03420 Nucleotide excision repair
HRI97_03480 (polA)
03440 Homologous recombination
HRI97_03480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsk03032
]
HRI97_03480 (polA)
03400 DNA repair and recombination proteins [BR:
tsk03400
]
HRI97_03480 (polA)
Enzymes [BR:
tsk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRI97_03480 (polA)
DNA replication proteins [BR:
tsk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HRI97_03480 (polA)
DNA repair and recombination proteins [BR:
tsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HRI97_03480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRI97_03480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UTD02191
LinkDB
All DBs
Position
complement(779713..782625)
Genome browser
AA seq
970 aa
AA seq
DB search
MQEFNDDTIYILDSYGLIYRCYFAFISRPLTNSRGENISALFGFFRNLHAVFTHYKPRYI
AAAFDSRTPTFRHEMYDEYKATRAKTPDDLHAQIPWIEDILASLGIPILQCDGYEADDII
ATVAAKAAASGRTCRILSGDKDLMQLVNGTTQILKPDTALIWKAIDSNGVKAEWGVLPEQ
MLDLLSLIGDASDNVPGVKGVGPKTACKYIDAYGNLDNIFAHADEIKGAAGEKLRAGKDD
AYFSQKLIKLCYDVPCVKNLEDAIPPVSFDFNAAAEKLSFYEAPTVAKSYAALAAENGST
GIETDEARKASAAKKGAHPARKNEASAEDEENGRTKYESSEQEPDTEEVPMLKPLTKNKG
EYRAVTDIEELKKIVDGIIASKEKCAAFDCETDSLDTMSASLVGFSLCTIPGKAVYVPLV
LTDALFSGPLISKQDALVQIARLFTDKDITVVMHNGKFDYEVLRTNGIALKGGDYPSPSC
KIADTMVAAWLLDPDKTGGASYALEYLAERKLSLSGIEYDDIVPKGGSFADVPLDKAADY
GAEDADFTLQLWHLFRERLEKNKLLNLFTDVEMKLLPILAEMELRGIHVNTKALDKYDAE
LTGEIETVQKEIYEIVGHEFNIASPKQLQEILFEELKLPHGKKTKTGYSTDTTVLEELSA
YHPVPQKILTYREKTKLQSTYVEALPKLCDKNKRLHTNYMQTGTATGRLSSRDPNLQNIP
VRNEDGRRIRSAFTALPNTHLISADYSQIELVVLAHLSGDKNMCKAFSEGVDIHRATASL
LFSTPPEKVTADERRIAKTINFGIIYGMSAFRLARDLGISRTQAASFIEHYFTQYSSIRH
FIDSTISFAETHGYVETIFGRRRKIININSKNKTEKAAAERIAVNTPVQGSAADIVKQAM
LDVDAALRKEKNGARLLLQVHDELIFECPSEKSVLDATIDMIRNKMESAVKLSVPLRVSI
EAGKNWGAFH
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattcaacgacgacaccatctatatcctcgattcgtacggactcatctaccgc
tgttattttgcgtttatttcgcggccgctgacaaacagccgcggggaaaatatttccgca
cttttcggttttttcagaaatctgcacgcggtgtttacgcactataaaccgcgttacatc
gccgcggctttcgattcgcgcacgccgacgttccgccacgaaatgtacgatgaatacaaa
gccacccgcgcaaaaacgcccgacgacctgcacgcccagattccgtggatcgaagacatt
ctcgcatctctcggcattccgatcctgcagtgcgacggctacgaagccgacgatatcatc
gcaacggttgcggcaaaggcggcggcaagcgggcgcacgtgccgcatcctttcgggcgac
aaagatttgatgcagcttgtaaacggcacgacgcagattttaaaacccgataccgccctc
atttggaaagcgatcgattcgaacggcgttaaagccgaatggggcgtccttcccgaacaa
atgctcgatctgctttcgcttatcggagacgcatcggacaacgtgccgggcgtaaaaggc
gtcgggccgaaaaccgcgtgcaaatacatcgacgcgtacggaaacctcgacaacattttc
gcacatgcggatgaaataaagggagccgcgggtgaaaagctgcgggcgggaaaagacgac
gcgtatttttcacaaaaattaataaaattatgttacgacgtgccgtgcgtaaaaaacctc
gaagatgcgattcctcccgtttcgttcgatttcaatgccgccgcggaaaagctttcattt
tacgaagcgcctaccgtcgcaaaatcctatgccgctctcgcagcggaaaacggaagcaca
ggcatcgaaacggacgaagcgcgaaaagcctctgcagcgaaaaaaggcgctcatccggcg
cggaaaaacgaggcaagcgctgaagatgaagaaaacggaaggacaaaatacgaatcttcc
gaacaggaacccgatacggaagaagttccgatgctcaagccgcttacgaaaaacaaaggc
gaataccgcgccgtaaccgatatcgaagaactcaaaaaaatcgtcgacggcattatcgca
tcgaaagaaaaatgcgccgctttcgactgcgaaacggacagtctcgacacgatgagcgct
tctctcgtcggcttttcgctgtgcacgatacccggcaaagcagtctacgttccgcttgta
ctcaccgacgcgcttttttcaggcccgctcatttcaaagcaggatgcgcttgtgcagatc
gcacggctttttaccgacaaagacatcaccgtcgtcatgcacaacggtaaattcgattac
gaagtgcttcgcacgaacggcatcgcactcaaaggcggagactacccctccccttcgtgc
aaaatcgccgacacgatggtcgccgcgtggctgctcgatccggataaaacgggaggagct
tcgtacgcgctcgaatatcttgcggagagaaagctctcgctttcgggcatcgaatacgac
gatatcgtacccaaaggaggaagctttgccgatgtaccgctcgacaaagccgccgactac
ggtgccgaagacgccgattttacgctgcagctttggcatcttttccgcgaacggcttgaa
aaaaataaattattaaatttatttaccgacgtcgaaatgaagctgcttcctatcctcgcg
gaaatggaactgcgcggcatccacgtaaacacaaaagcgctcgacaaatacgacgccgaa
ctcaccggtgaaatcgaaacggtgcaaaaagaaatatacgaaatcgtcggacacgaattc
aatatcgcttctccgaaacagctgcaggaaattttattcgaagaattgaaattgccgcac
ggcaaaaagacgaaaaccggttattcgacggacacgacggtgctcgaagaactttcggct
tatcatccggtgccgcaaaaaattctcacatatcgtgaaaagacaaagctgcagtcgacc
tacgtcgaagcgctgccgaaactctgcgataaaaacaaacgtttgcacacgaactatatg
cagacgggaacggcgaccggacggctttcatcgcgcgatccgaacttgcaaaacattccg
gtgcggaacgaagacggcaggagaatccgctcagcctttaccgctttgccgaatacgcat
ctcatttcggccgattattcgcagatcgaactcgtcgtcctcgcacacctttcgggcgac
aaaaacatgtgcaaagcgttcagcgagggcgtggacatccaccgcgcaacggcatccctt
ttattttcgacgcctccggaaaaagttacggcggacgaaagacgcattgcaaagacgatc
aatttcggcatcatctacggcatgagcgcattccgcctcgcgcgcgatttgggcatttca
cgaacgcaggccgcttcgtttatcgaacattattttacgcagtattcgtcgatcagacat
tttatcgattcgacgatttcctttgccgaaacgcacggatacgtcgaaacgattttcgga
cgacgcagaaaaattattaatattaattcgaaaaacaaaacggaaaaagctgcagccgaa
cgcatcgcggtaaatacgcccgtacagggaagcgcggcggacatcgtaaaacaggcgatg
ctcgacgtggacgccgctctccgaaaagaaaaaaacggcgcccgccttttgctccaagtg
cacgacgaactcatcttcgaatgcccgtcggaaaaatccgtcctcgatgcgacgatcgac
atgatacgcaataaaatggaaagcgcggtaaaactttcggttccgctccgcgtttcgatc
gaagcgggtaaaaactggggagccttccattga
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