Treponema socranskii subsp. buccale: HRI97_03960
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Entry
HRI97_03960 CDS
T08383
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HRI97_03960 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsk03400
]
HRI97_03960 (xseA)
Enzymes [BR:
tsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HRI97_03960 (xseA)
DNA repair and recombination proteins [BR:
tsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HRI97_03960 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF2274
Motif
Other DBs
NCBI-ProteinID:
UTD02278
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All DBs
Position
complement(898770..900008)
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AA seq
412 aa
AA seq
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MAHSAQDASAFFSVTQITNLIKETIEGSFGTVIVEGEISNCKLTSAGHIYLTLKDSGAQL
GCAMWRSATPSLSFSPKDGMLVRCTGCLTVYPPHGKYQLVISRMEMAGTGNILQMLEERK
KRLAAEGIFDEAHKKPLPLFPKTVGIVTSATGAALRDILQIMKRRNPCVSAVILPATVQG
EGAAETIVRQIKVANYFRLCDVLIVGRGGGSLEDLLPFSDEAVVRAVYESNIPVISAVGH
EIDWALSDYAADFRASTPSAAAEAAVPLKSDIIRTLQTYADIFHTEIKRKVENMKLIVRT
FNPENLELQFRTIEQPLLARFDGAKVALLQNIDEKLKDAKHRIALCTHVLESASPEKIFA
RGYSMVRDTASGEVVRDASLVAVGAELEIVPAKGQLTATVKSVCTEAKHIIN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcacattcggctcaagacgcctccgcgtttttttccgtcacgcagatcacaaatctc
atcaaagaaacgatcgaaggttcgttcggtaccgtcatagtcgaaggtgaaatttccaac
tgcaaactgacgagcgccggccacatctatttgacactgaaagattccggtgcgcagctc
ggatgtgcgatgtggcggagcgcgacgccctctctttcgttttcgccgaaagacggtatg
ctcgtgcgctgtaccggatgccttacggtgtacccgccgcacggcaaataccagctcgtc
atttcgcgcatggaaatggcgggcacgggaaatattttacagatgctcgaagagcgcaaa
aagcgcctcgccgccgaaggcatattcgacgaagcgcacaaaaaaccgctgccgcttttt
ccgaaaacggtcggtatcgttacgagcgcgacgggagccgccctgcgcgatattttgcag
attatgaagcggcggaatccctgcgtatcggcggtcattttgcccgcaacggtgcaggga
gaaggcgcggcggaaacgatcgtgcggcagataaaagtcgcaaattatttcaggctttgc
gacgtgctcatcgtcgggcgcggaggcggctccctcgaagatctgcttcccttcagcgac
gaagcggtagtacgtgccgtctacgaatcgaacataccggtgatttccgccgtcggacac
gaaatcgattgggcgctttccgattacgcagccgattttcgagcctcgactccgtcggcc
gcagcggaagccgcagttccgctcaaaagcgatatcattcgtacgctgcaaacctatgcc
gatatcttccatacggaaataaaacgcaaagtcgaaaacatgaaactcatcgtgcgcaca
ttcaatcccgaaaatctcgaactgcagtttagaactatcgaacagccgctccttgcgcgc
tttgacggcgcaaaagtcgcgctgctgcaaaacatcgatgaaaaattaaaagacgcgaag
caccgcatcgccctgtgtacacacgtactcgaaagcgcaagtcccgaaaaaatttttgca
cgaggctattcgatggtacgcgacacggcaagcggagaagtcgtgcgggatgcatcgctc
gtcgcagtcggagcggaacttgaaatcgttccggcaaaaggtcaacttacggcgaccgtc
aaaagcgtatgcacagaggcaaagcacattattaattaa
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