Treponema socranskii subsp. buccale: HRI97_04450
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Entry
HRI97_04450 CDS
T08383
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk00470
D-Amino acid metabolism
tsk00550
Peptidoglycan biosynthesis
tsk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HRI97_04450 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HRI97_04450 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsk01011
]
HRI97_04450 (murD)
Enzymes [BR:
tsk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HRI97_04450 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
tsk01011
]
Precursor biosynthesis
Amino acid ligase
HRI97_04450 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
DUF5752
Motif
Other DBs
NCBI-ProteinID:
UTD02359
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Position
complement(1011867..1013417)
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AA seq
516 aa
AA seq
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MNFKNTESAPHVYPEGCVFSSLADIKNKHITVMGLGLNGGGEAAVRFFLKYGAYVVATDM
KTARELKPTVDSLNNDPSLNRTRLTYRLGEHKIDDFRFADCIIKNPGIKYEGNAYLACAK
AIETDMSVFLAFTKAPIIAVTGSKGKSSTASAIYFGLSQAGLMAFLGGNITVSPLSFLEK
TNQTTPVVLELSSWQLADLRGRKLLKPRISLITKIVPDHQNWYGDMASYVADKRLIYADQ
GKDSCSIFDADPDDKETPEPEAGLSWGDFFARESKATVFRYSTKALPSGVYGVWQEADAD
GKFLGKARLPGNDMPVILLRSISVPGLHMRANVLNAALVMALSGIRAENISNILSRWKGI
PHRLQYFHVWNRNRMRFHFYNDSCATVPEAAVAAVRSFKVPVILIAGGTDKGLSQNSLSE
ALSHDARKRVKALYLLSGTATDKLTELLRADVIPFYGPYDSLGELLAALKANECADDERG
GNEVVLFSPGATSFGMFTNEFERGSKFMEEVKRIFP
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaaaatacagaaagcgctcctcacgtatatcccgaaggctgcgtgttttca
tccctcgccgatataaaaaacaaacacatcaccgtcatgggactcggtttaaacggcggc
ggtgaagcggccgtcagattttttttgaagtacggagcatacgtcgttgcgaccgatatg
aaaaccgcccgcgaattgaaaccgaccgtcgattcgctcaacaacgacccctcgctcaat
cggacacggcttacctatcggctcggtgaacacaagatcgacgatttccgctttgcggac
tgcattattaaaaatcccggaataaaatatgaaggcaatgcctatctcgcctgtgcaaaa
gcgatcgaaaccgatatgagcgtcttcctcgcgtttacgaaagcgccgattatcgcggtg
acgggcagcaaaggaaaatcttcgactgcaagtgcgatctatttcggtctttcgcaggcg
ggtctcatggccttcctcggcggaaacatcaccgtgagcccgctttcgtttttggaaaag
acgaatcaaacgacgcctgtcgtactcgaactttcgagctggcagctcgcggatctgcgc
ggaagaaaattattaaaaccgcgcatttcactcatcacgaagatcgtacccgaccatcaa
aactggtacggcgacatggcatcctacgtcgccgataagcgtctcatctacgccgatcag
ggaaaagacagctgttccattttcgatgcggatcccgacgataaagaaacgcccgaaccc
gaagcgggtctttcgtggggcgatttttttgcacgcgaatcgaaagcgacggtcttccgc
tacagtacgaaagcccttccttctggcgtatacggcgtttggcaggaggcggatgcggac
ggaaaatttttgggaaaggcgcgccttccgggaaacgatatgcctgtaatcctcctccgc
tcgatatccgttccgggactccacatgagagcgaacgttttgaatgcggcgctcgtcatg
gcgctttcgggaatcagagctgaaaatatttcaaatattttaagccgatggaaaggcata
ccgcaccgcttgcagtacttccacgtatggaatcgaaaccgcatgagatttcacttttac
aacgactcgtgtgcgaccgttcccgaagccgccgtcgccgccgtcaggtcgtttaaagtg
ccggtgattttgatcgcaggcggaaccgacaaaggtctttctcaaaactcgctttccgaa
gcgctttcgcacgatgcgcgaaaacgggtaaaagcgctgtacttgctttcgggaacggca
accgataaattgacggaattgctccgtgccgacgttatcccgttttacggtccctacgat
tctctcggcgaactgctcgctgcactcaaagcgaacgaatgcgccgacgacgagcggggc
ggaaacgaagtcgtcctcttttctcccggcgcgacatcgttcggtatgtttacgaacgaa
ttcgaacgcggttcgaaatttatggaagaagtaaaacgcatatttccgtaa
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