Treponema socranskii subsp. buccale: HRI97_05045
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Entry
HRI97_05045 CDS
T08383
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
tsk
Treponema socranskii subsp. buccale
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsk03009
]
HRI97_05045
Enzymes [BR:
tsk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
HRI97_05045
Ribosome biogenesis [BR:
tsk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HRI97_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
UTD02469
LinkDB
All DBs
Position
1154549..1155304
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AA seq
251 aa
AA seq
DB search
MIRLDKLLSHGGLGSRSSVKKLLRSGAVTVNGKSVFDSSMRVDEECDIVAADGKKIEIRK
EVYLMMYKPSGYVCAKRDGLYRTVFDLLGDAYRTPFFEDNLHTIGRLDCDTEGLLILTTD
GELTHRITSPKSECGKTYFVRLAKKVRSAEGSAYVSECAKGVHIAAEGREKEADCKSARL
VWLGSGDEKDECTLTIYEGKFHEVKRIFSALGNEVVYLKRIAIGALRMDESLERGGCREL
SEDEIELLSRI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcgacaaactgctgtcgcacggaggtttgggctcccgctcttccgtaaaa
aaacttctccgttcgggcgccgtaacggtaaacgggaaaagcgtattcgactcatcgatg
cgtgtcgatgaagagtgcgatatcgtcgccgcggacggtaaaaaaatcgaaatccgaaaa
gaagtctatctcatgatgtacaagccttcggggtatgtgtgcgcaaagcgcgacggactt
taccgaacggttttcgatttgctcggcgacgcgtaccgtacgccttttttcgaagacaat
ctgcacacgatcggaaggcttgactgcgacaccgaaggcctgctcatccttacaaccgac
ggagagcttacgcaccgtatcacttctccgaaaagcgaatgcggaaaaacgtattttgtg
cgcctggcaaaaaaagtgcgaagcgcggaaggatcggcctacgtttccgaatgtgcgaaa
ggcgtgcacatagcggcggaaggaagagaaaaagaagccgattgcaaaagcgctcgcctc
gtatggctcggaagcggcgatgaaaaagacgaatgcacgcttacgatctacgaaggaaag
tttcacgaagtaaagcgtatcttttccgcgctcggaaacgaagtcgtctatttgaagcgc
atcgcgatcggcgcacttcggatggacgaaagccttgagcggggcggctgtcgcgaactt
tcggaagacgaaatcgaactgcttagccgcatctga
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