Treponema socranskii subsp. buccale: HRI97_05840
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Entry
HRI97_05840 CDS
T08383
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tsk
Treponema socranskii subsp. buccale
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HRI97_05840 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsk03019
]
HRI97_05840 (rnc)
03009 Ribosome biogenesis [BR:
tsk03009
]
HRI97_05840 (rnc)
03036 Chromosome and associated proteins [BR:
tsk03036
]
HRI97_05840 (rnc)
Enzymes [BR:
tsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HRI97_05840 (rnc)
Messenger RNA biogenesis [BR:
tsk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HRI97_05840 (rnc)
Ribosome biogenesis [BR:
tsk03009
]
Eukaryotic type
90S particles
RNase
HRI97_05840 (rnc)
Prokaryotic type
rRNA processing factors
HRI97_05840 (rnc)
Chromosome and associated proteins [BR:
tsk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HRI97_05840 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UTD02619
LinkDB
All DBs
Position
1309164..1309922
Genome browser
AA seq
252 aa
AA seq
DB search
MRIKRKNFLSERKKRLLAFCKPLGLRFHDLSLLELAFRHRSYSNEDDDKRPVNNERLEFL
GDSVLGLAAAAYLYKTFEDNPEGDLAKIKAVVVSEKTLAPIALRFGIDKMLVLGHGEELS
GGRQKPAILADCMESIIGAYFLDSGYAAAEKYVLSFLVSEIEKVHDDRGSKDYKTLLQEL
YQKKTKECPRYETVSVTGPDHDRTFSVTVHLGDAAYGPESGKSKKEAEQKAAKKAYTVLT
GLVQNCKPIGLF
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcgcataaaacggaaaaactttttaagcgaacgcaaaaaacgactcctcgcattttgt
aagcctctcggcttgcgctttcacgatctttcgcttcttgaactcgcgttccgtcatcgt
tcctactcgaacgaagacgacgataaacgtcccgtcaataacgaacgcctcgaattttta
ggcgattcggtgctcgggcttgcggcggcggcatatctgtacaaaaccttcgaagacaac
cccgaaggggatttggcaaaaatcaaagccgttgtcgtttcggaaaaaacgctcgcgccg
atcgcgctccgcttcggtatcgataaaatgctcgttttgggacacggagaggagctgagc
ggcggcaggcaaaagcccgccattctcgccgactgcatggaatcgatcatcggcgcgtac
tttctcgactcgggctatgcggccgccgaaaaatacgtgctttcgtttctcgtctccgaa
atcgaaaaagtgcacgacgaccgcggctcgaaagattataaaacgctgcttcaggaattg
tatcaaaaaaagacaaaagagtgtccccgttatgaaacggtgagcgtcacgggtcccgat
cacgaccgcacgttttccgttacggtgcacctcggagatgccgcatacggccccgaaagc
ggcaaaagcaaaaaagaagccgaacagaaagccgccaaaaaagcgtatacggttctgacc
gggcttgtacaaaactgcaagcctatcggcttgttttga
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