Treponema socranskii subsp. buccale: HRI97_06745
Help
Entry
HRI97_06745 CDS
T08383
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HRI97_06745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsk03000
]
HRI97_06745
Transcription factors [BR:
tsk03000
]
Prokaryotic type
Helix-turn-helix
Other families
HRI97_06745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
GAF_3
AAA_5
AAA
AAA_2
AAA_16
HTH_8
AAA_22
AAA_14
nSTAND3
AAA_3
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
UTD02776
LinkDB
All DBs
Position
complement(1491739..1493292)
Genome browser
AA seq
517 aa
AA seq
DB search
MTSIGLDELNTLIEINNRINSNYADLDALLVYILEAAMRLVHCESSSLLLVNADDTLRFV
IALGPKGAEAKDIPVDKSSIAGWVASHRQPLILRDVVNDPRFSDHVQHKTGYVSKTMIAV
PLCVGDECIGVIELINKAGGEYFDDDDLEILNMLCSQAGIAYRNAAKYQSAQNKISALQN
TLSAGSDYHPFIAKSPVISDLLKMIDGIAKTNLSIIITGESGVGKELVAEQIHRKSDREG
KPFVRVNCAALSPSLLESELFGHVKGAFTDAKADHKGYFETADGGTIFLDEIGEMPLELQ
AKLLRVIQSKQFQKVGSSKTVSVDVRVVAATNRDLEAMMSEQKFRSDLYFRLSGIPLKVP
PLRERKEDIPALADFFLQKFSGETKKNFTGFSRSAMDALYSYYWPGNIRELENSIERACV
LGTPPLINAFDLRIGYEERGSGKNEIERMAEEYASDASGDRSLKEAVNKFKSAYVRKILE
ETAWNKTKAGKILGIQRTYVSRLLNDLRDREEESEEM
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgattggtttagatgaactcaatacgctcatcgaaatcaacaacaggatcaat
tcgaattacgccgatttggacgcgctgctcgtctacatcctcgaagcggcgatgcgtctc
gttcactgcgaatcgtcgtcgctgctgctcgtaaacgccgacgatacgctgcgtttcgtc
atcgcgctcgggccgaaaggggcggaagcgaaagacattcccgtcgataaaagcagtatt
gccggctgggtcgcatctcaccggcagccgcttatcctgcgggatgtcgtaaacgatccg
cgtttttccgatcacgtgcagcataagacaggctatgtttccaaaacgatgatagcggtt
ccgctgtgcgtcggcgacgaatgcatcggcgtcatcgaattgataaacaaagcgggcgga
gagtatttcgacgacgacgatctcgaaatactcaatatgctgtgcagtcaagcgggcata
gcgtacaggaatgcggcgaagtatcagtccgcgcagaataaaatttccgcgctgcaaaat
acgctttcggcggggagcgattaccatccgtttatcgcaaagagcccggtcatttcggat
ctgctcaagatgatcgacggcatcgcgaagacgaatctttcgatcatcatcaccggcgaa
agcggtgtcggaaaagagctcgttgccgaacagatacacagaaaaagcgatcgggaggga
aagcctttcgtgcgggtcaactgcgcagctctttctccttcgctgctcgaaagcgagctt
tttgggcacgtgaaaggcgcgtttaccgatgcaaaagccgatcacaaaggctattttgaa
acggcagacggcggaacgatttttctcgacgaaataggagagatgccgctcgaactgcag
gcgaaacttttgcgcgtcatacaatcgaagcagtttcaaaaagtcggatcgagcaaaacc
gtgtcggtcgacgtgcgcgtcgtcgctgcgacgaaccgcgacctcgaagcgatgatgagc
gagcaaaagttccgaagcgatctgtacttccgcttgagcggcatacctttaaaagttcct
ccgcttcgcgagcggaaagaggatattcccgctcttgccgatttctttttgcaaaagttt
tcgggagaaacgaaaaagaattttaccggcttttcgcgttcggcgatggatgcgctgtat
tcgtattattggccgggaaacatccgcgagctcgaaaattcgatcgaacgcgcatgcgtg
ctcggtacgcctcctcttatcaatgcgttcgacctccgcatcggttatgaagagcgcggg
agcgggaaaaacgaaatcgaacgtatggcggaggaatacgcgtcggacgcgagcggcgac
cgctctctcaaagaagcggtgaataaatttaaaagcgcctacgtgaggaaaattttggaa
gaaaccgcttggaataaaacgaaagcgggaaaaatactcggcatccagcggacatacgtt
tcgcgcttgctgaacgatcttcgcgaccgcgaagaagaatcggaagagatgtga
DBGET
integrated database retrieval system
