Treponema socranskii subsp. buccale: HRI97_06750
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Entry
HRI97_06750 CDS
T08383
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HRI97_06750 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tsk03011
]
HRI97_06750 (rpsA)
Ribosome [BR:
tsk03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HRI97_06750 (rpsA)
Bacteria
HRI97_06750 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Cytidylate_kin
S1_2
Spt6_S1
PCB_OB
Cytidylate_kin2
AAA_17
AAA_18
AAA
AAA_22
dNK
SKI
AAA_33
DUF5666
AAA_28
RNA_helicase
AAA_16
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UTD02777
LinkDB
All DBs
Position
complement(1493313..1495670)
Genome browser
AA seq
785 aa
AA seq
DB search
MVIAIDGPAGTGKSTIASLLAKKLGITFLNSGSFYRALTLALLKNGIDLNDEAAVVDFCK
KQKLDYVDSHLILNGDDVESLLHSDEVSAHAAGVSAFPEVRRIVNDRLRELTKSLDIVSE
GRDMTTVVFPDADCKFYLDASLDVQAERRFKQGVSGMTLEEIKEAIKKRDEIDKNKKEGA
LVVAPDAVYIDTSTLTIEKVCEIILNQIHEKGSKMETQEVEKEQNRDSKDKFQTQLEESL
NSLSTPENGQLVDGTVVAVTDDTVFVDVNCKSEGRIPKSEFGSKAPEVGDTVTVKLVNKF
GKNGPEISKRQADEKRLWKDITQAFKDKIPIDGTVAKVVKGGFEVDLGGGIHAFLPISQS
DSQKVEKPESLVGTESKMYIERLYSDNKANVVVNRRKYLEEQIGKARDEFFANVKIGDTV
KGTVKSFTSFGAFIDLGGFDGLLHINDMSWGHVARPKDFVKKGQEIELKVIRMDEAEKRI
NLSLKHFTEDPWMHFEDTYHVNDVVKGKVTKLTDFGAFIELEEGIEGLVHISEFSWTKKV
NKPSDMVKVGDEVECMILGYDIQAGRVSLGLKQVTANPWDTIGEKYPVGSRVKGKVIKIT
NAGAFIELEDGIDGFLHGDDISWTKKVKHPGSELEQDQEIEAVVIENDAESHRIRLGIKQ
LTDNPWKLFAETHKPGSTLEGEITSITEFGIFVKAPEGIEGLVNKTNLSEDRNVPFEEAV
KNYKVGDKINVYVVDVNVEKEKIAFSVREFKKAQERAAISQYIAKPDENDGAYTFGDFLQ
TQKKD
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggttattgcgatagacggacctgcgggtaccggtaaaagtacgattgcatctcttctt
gcaaaaaagctcggcattacgtttttaaacagcggcagtttttaccgcgcgctcacgctc
gcgcttttaaaaaacggcatcgatttgaatgacgaggcggcggtcgtcgatttttgcaaa
aaacaaaaactcgattacgtcgattcgcatttgattctaaacggcgatgacgtcgaatcc
ttactgcactcggacgaagtgagcgctcacgcggcaggcgtgtccgcgtttcccgaagta
cgccgcattgtcaacgatcgccttcgcgaattgacaaaatcgctcgatatcgtttctgaa
gggcgcgatatgacgaccgtcgtatttcccgatgccgactgtaaattctatctcgacgcg
tcgctcgacgtacaagccgagcggagatttaaacagggcgtgagcggtatgacgctcgaa
gagatcaaagaagcgataaaaaagcgcgacgaaatcgacaaaaacaaaaaagaaggcgcg
ctcgtcgtcgctcccgacgccgtatatatcgatacgtccaccttgacgatagagaaagtt
tgtgagataatattaaatcaaattcacgaaaaagggtcaaagatggaaacacaggaagtg
gaaaaggaacaaaaccgggactccaaggataagttccagacacaattagaagaatctctg
aacagtttgagcacgccggaaaacggacagctcgtcgacgggacggtcgtcgcggttacc
gacgataccgtatttgtcgatgtaaactgcaaatcggaaggcagaatccccaaatcggag
ttcggttcaaaagcgccggaagtcggggatacggttacggttaaactcgtcaataaattc
ggcaaaaacggtccggagatttccaaacggcaagccgatgaaaagcgtttgtggaaagac
attacccaagcgtttaaagataaaatacctatagacggtaccgtcgcgaaagtcgtcaaa
ggcggtttcgaagtcgatttgggaggcggcatccacgcgtttttgccgatcagccagtcc
gacagccaaaaggttgaaaagcccgaatcgctggtcggtaccgaaagcaaaatgtatatc
gaacggctgtattcggacaacaaagcgaacgtcgtcgtcaaccgcagaaagtatctcgaa
gaacagatcggtaaagcgagagacgaattttttgcgaacgtaaagatcggcgacacggta
aagggtaccgtgaagagctttacgagtttcggcgcctttatcgacttgggcggattcgac
ggacttttgcacataaacgatatgagctggggacacgtcgcccgtccgaaagatttcgtc
aaaaaagggcaggagatcgaactcaaagtgatccgcatggacgaagccgaaaaacgtatc
aatctttcactgaagcactttaccgaagacccgtggatgcattttgaagacacctatcac
gtcaacgatgtcgtaaaaggcaaagtgacgaagcttaccgacttcggcgcctttatcgaa
ctggaagagggcatcgaagggctcgtgcatataagcgaattttcgtggacgaaaaaagtc
aataaaccgtccgacatggtaaaagtcggggacgaagtcgaatgtatgatcctcggctac
gatattcaagccggccgcgtatcgctcggtttaaagcaggtgacggcgaacccgtgggat
acgatcggcgaaaaatatccggtcggcagccgcgtaaagggcaaagtcataaagatcacg
aatgcgggcgcctttatcgaactcgaagacggtatcgacgggtttttgcacggagacgat
atttcgtggacgaaaaaagtcaagcatccgggcagcgaactcgaacaggatcaggaaatt
gaagcggtcgtcatcgaaaacgatgcggaaagtcaccgtatccggctcggcattaagcag
cttaccgacaatccgtggaaactctttgccgaaacgcataagcccggttcgacgcttgaa
ggtgagatcacgtcgatcacggagttcggcattttcgtcaaagcgccggaaggcatcgaa
ggtctcgttaataaaacgaatttgagtgaagaccgcaacgtaccctttgaagaggcggta
aaaaattataaagtcggcgataagatcaatgtgtacgtcgtcgatgtcaacgtcgaaaaa
gaaaagatcgctttttccgtgcgcgaatttaaaaaagcgcaggagcgggcggccatttcg
cagtatatcgcaaagccggatgaaaacgacggcgcgtataccttcggcgactttctgcag
acgcagaaaaaagactga
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