Treponema socranskii subsp. buccale: HRI97_06965
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Entry
HRI97_06965 CDS
T08383
Name
(GenBank) Smr/MutS family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HRI97_06965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsk03400
]
HRI97_06965
DNA repair and recombination proteins [BR:
tsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HRI97_06965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UTD02816
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Position
1534998..1537487
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AA seq
829 aa
AA seq
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MDASALSELDYFRIRDEASVYCVSEEGKKSFCQRLPLTDEAKIEALKNISRDWSAYNSSS
FGIALFSWPPVAPLFSRISVPGASLSVEEFHTLSLFCASVKKLSSSIEGAEKELSIETLS
ETVRRLPDLAKPASEIARVVASDGELKDLPELREIKTKIANLNKKIQSIMRSYTGNQKLS
SALESTVPALRSGHQVLAVKASHRSRIAGIVHEVSQSGQTVYIEPEESVRTGNELLEEEA
NLQIAVKAILKKLTASLAPYVPLFEAALPSMIAIDEAYARAKWGGEHHATYALPCGKKDA
LTLLQARHPLLGEKAVPIDVRFMSGKRVLIITGPNTGGKTVTLKTIALFSLLNQSGFPIP
AAEGSRLAIFDKVFADIGDGQSIDSSLSTFGSHMKNIARAIAECGEKSLVLLDELGSGTD
PQEGAAIGMAVLDALIEKKAFTLVTTHQGVLKNYGWTHESCINASAEFDGKTLAPTYRIL
MGVPGESRALDIAQKSGLPPSVVEKAREYIAGNTADISALIAGLTAKHAEADALVQDCRR
KEAELAERQYVLDAKELENRQKEQELQEAAHEKAEAFLSESRKRLENLVRVIREGEITRE
KTLAVKRYIDELTEAVASQKKELDEKGEKLSDAQNAFKNITPMPHPKSAKPTKRRVKNAE
ALRALRSAGNANETKSKAPSFEPGTAVIAGEKRMSGTILSRTGKERFLVQFGSIKIEMKQ
KDLTPAASLSLSSAPLVTVETNREDAGEHPAFELRLLGLREAEAIAALERQLDLCTIHDF
KRFSVIHGKGNGVLQQAVQNYLSHCAGVKAFRFAPPEDGGAGKTYVELH
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcagcactttccgagctcgactatttccgtatcagagacgaagcgtccgtc
tactgcgtaagcgaagaggggaaaaagagtttttgccagcggcttccgcttacggacgaa
gcgaaaatcgaagcgctgaaaaatataagccgcgattggagcgcatacaactcatcttcg
ttcggaatcgcgcttttttcgtggcctccggtcgctcctcttttttctcgtataagcgtt
cctggcgcttctctttccgtcgaagagtttcacacgctttcgctcttttgcgcttcggtc
aaaaaactttcgtcatccatcgagggagccgaaaaagagctttcgatagaaacgctttcc
gaaaccgtccgacgccttcccgatttagcgaagcccgcgtccgagatcgcacgcgtcgta
gcttccgacggagagctgaaagatcttcccgaactccgcgaaataaaaaccaaaatcgca
aacctcaataaaaaaattcaaagcatcatgcgttcgtatacgggaaatcaaaagctttcc
tccgccctcgaatcgacggtgcccgctctccgttcgggtcatcaagtgcttgcggtcaaa
gcttctcacagaagtcgcattgcgggtatcgtgcacgaagtgtcgcaatcggggcaaacc
gtatacattgaaccggaagaatcggttcggacgggaaacgaactgctcgaagaagaggcg
aatcttcagatcgcggtcaaagcgattttgaaaaagcttaccgcatcgcttgcgccttat
gtgcccctatttgaagcggctcttccttctatgatcgcgatcgacgaagcttatgcgagg
gcgaaatggggcggcgaacaccacgcgacctatgcgcttccctgcggaaaaaaagatgcg
ctcacgctgcttcaagcgcgccatcccctgctcggagaaaaagcggtgccgatagacgtg
cgctttatgagcggaaaaagagttttaataattacggggccgaataccggcggcaaaacg
gttacgctcaaaacgatagcgctcttttcgcttttgaaccaaagcggctttccgattccc
gcagcggaaggctcacgtcttgcgatcttcgataaagtgtttgccgacataggcgacgga
caatcgatcgactcgtcgctttcgacgttcggctctcacatgaaaaacatcgcgcgcgcg
atcgccgaatgcggcgaaaaaagcctcgtcctcctcgacgaactcggaagcggtaccgat
ccgcaggaaggtgctgcgatcggcatggcggttctcgacgcgcttatcgaaaaaaaagcg
tttacgctcgtaacgacgcatcagggcgtactcaaaaattacggatggacgcacgaaagc
tgcatcaacgcgtcggccgagttcgacgggaaaaccctcgcgccgacttatcgcatactc
atgggcgttccgggcgaaagccgcgccctcgacatcgcgcaaaaaagcggtctccctcct
tccgtcgtcgaaaaagcgagagagtatatcgcgggaaatacggccgatatttccgccctt
atcgcggggcttacggcaaagcacgccgaagccgatgctctcgtgcaagactgccgtcgg
aaagaagcggaacttgcggaaagacaatacgttctcgatgcaaaagagctcgaaaaccgg
caaaaggagcaggaactgcaagaggcggcgcacgaaaaagccgaagcttttctttcggaa
agccgaaaacgccttgaaaatctcgttcgcgtcatcagagagggcgaaatcacgagggaa
aaaacgctcgcggtaaaacgctatatcgacgaattgacggaagcggtcgcctcgcaaaaa
aaagagctcgacgaaaaaggcgaaaaactttccgatgcgcaaaacgcatttaaaaatatc
actccgatgccgcacccgaaaagcgcgaaaccgacaaaacgccgcgtgaaaaacgccgaa
gcgctccgcgcgctccgaagcgcgggcaatgcaaacgaaacgaaaagcaaagcgccgtct
tttgaaccggggactgccgtcattgcaggtgaaaaacgtatgagcggcacgatcctttcg
cgcacgggcaaggaaagatttctcgtacagttcggttcgataaaaatcgaaatgaagcaa
aaagatttgacgcccgccgcttcgctctcgctttcatccgcaccgcttgtcaccgtcgaa
acgaatcgtgaagatgcgggcgaacatccggccttcgaactgcgtcttttgggactccgc
gaagccgaagcgatcgccgccctcgaacggcagctcgacctctgcacaattcacgatttt
aagcgcttcagcgtcatacacggaaagggaaacggcgtgctgcagcaggcggtgcaaaat
tatctttcgcactgtgcgggcgtaaaagcgttccgttttgcacctcccgaagacggagga
gcgggaaaaacctacgtcgaactgcattga
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