Treponema socranskii subsp. buccale: HRI97_07455
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Entry
HRI97_07455 CDS
T08383
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tsk
Treponema socranskii subsp. buccale
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsk03032
]
HRI97_07455 (topA)
03400 DNA repair and recombination proteins [BR:
tsk03400
]
HRI97_07455 (topA)
Enzymes [BR:
tsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HRI97_07455 (topA)
DNA replication proteins [BR:
tsk03032
]
Prokaryotic type
DNA Topoisomerases
HRI97_07455 (topA)
DNA repair and recombination proteins [BR:
tsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HRI97_07455 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_3
Toprim_4
Toprim_2
zf-C2HC
Motif
Other DBs
NCBI-ProteinID:
UTD02905
LinkDB
All DBs
Position
complement(1646141..1648300)
Genome browser
AA seq
719 aa
AA seq
DB search
MADAAKKRASKTKESTLVIVESPAKAHTIEKYLGPGYTVKASMGHLIDLPKSRLAIDVDH
DFQPEYITVRGRAKLLKELQKDAKKSTAVLLASDNDREGEAIAWHLNKALKEKTSAPISR
IVFNEITPIAIKEAVKHPDEIVESKVNAQKARRVLDRLVGYNLSPLLWSKVKNGLSAGRV
QSVALRLICEREEEVENFLPEEYWTLDADFVKGKTTFTAQLVSYKGEKAELKNEAEVNKI
IDLIKNSDCTVVSVKTTDKTVKPKAPFTTSKLQQAAANRLGYTSRKTMQIAQQLYEGVNV
GESRVGLITYMRTDSVRISQTALDEVRSWLSKNYPDDLPEEPVKYEVGKAAQDAHEGIRP
TYVSYTPDSIKEYLTRDQLRLYSIIWERFVSSQMNNAKTRTTSVEIASGDAVFRASASKI
VDKGFYHVIKLLSSKEDKTGNLPSLKEGEKIACEKFYPEQHFTQGPARYTDASIVRTLEE
KGIGRPSTYAPIISVLLDRYYVTRTNRQLVPTVLGRMICKILVESFPNVINEHFTAEVEN
DLDKVEQGALVWNGMIKDFYGPFKKRVDDVMETQESVKGFLDEKTDIMCEKCGKPMVKKL
GRFGYFLACSGFPECRNTRSIPLAKCPMPGCDGEIVARKTKGRGKEFYGCTNYPKCNFIS
HFKPIDQYCPKCGWFLVEKYDKKNGTYKSCINPDCTFLHSADDAAAFEKESEGAPESRQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgcagcaaaaaaacgtgcttcaaaaacaaaagaatcgacgctcgtgattgtc
gaatctccggcaaaagcgcatacgatcgaaaaatatctcggcccgggctatacggtaaaa
gcgtccatgggacacttgatcgatttaccgaaatcgcgcctcgcgatcgacgtcgatcac
gattttcagcccgaatacatcaccgtgagaggcagggcaaaattattaaaagagctgcaa
aaggatgcgaaaaaatcgacggccgtcctgctcgcaagcgataacgaccgcgaaggagaa
gcgatcgcatggcatttgaataaggcgctgaaagaaaagacgagcgctccgatcagccgc
atcgtattcaacgaaatcacgccgattgcgatcaaagaagcggtcaagcatcccgacgaa
atcgtcgaaagcaaagtgaacgcgcaaaaagcgcggcgcgtgctcgaccgcctcgtcggc
tacaatttaagtccgcttttgtggagtaaagtgaaaaacggtctttcggccggccgcgtg
cagtcggtcgcgcttcgtctcatctgcgagcgcgaagaagaagtggaaaattttctgccc
gaagaatattggacgctcgatgcggattttgtaaaaggcaaaacgacgtttaccgctcag
ctcgtttcgtacaagggtgaaaaggctgaattgaaaaacgaagccgaagtcaataaaatt
atcgacttgataaaaaattccgactgcacggtcgtaagcgtaaagacgaccgacaaaacg
gtaaaaccgaaagcgccgtttacgacgtcgaaattgcagcaggcggccgcaaaccgcctc
ggctacacgtcgaggaaaaccatgcagatcgcgcagcagctctacgaaggcgtcaacgtc
ggtgaaagccgcgtaggtctcatcacgtatatgcgtaccgattccgtgcgcatttcgcaa
accgccctcgacgaagtgcgttcgtggctttcaaaaaattatcccgacgatcttccggaa
gagcctgtaaagtatgaagtcggaaaagcggctcaggacgcgcacgaaggcatccgcccg
acctacgtgtcgtatacgcccgattcgataaaagaatatttgacgcgcgatcagcttcgc
ctctattcgatcatttgggagcgcttcgtttcgagtcagatgaacaacgcgaagacgcgg
acgacgagcgttgaaatcgcttcgggcgatgcggttttccgcgcatccgcaagcaaaata
gtcgacaaggggttttatcatgtcatcaaactcctttcgtcgaaagaggataaaaccgga
aatctcccgtcgctgaaagaaggcgaaaaaatcgcgtgcgaaaaattttatcccgaacag
cactttactcaagggcccgcgcgctataccgatgcgtccatcgttcgaacgctcgaagaa
aaagggataggcagaccttcgacttatgcgccgatcatttcggttttgctcgaccgctat
tatgtgacgcggacgaaccgacaactcgtgccgactgtcctcggccgcatgatatgtaag
atcctcgtcgaatcatttccgaacgttatcaacgaacattttaccgcggaagtcgaaaac
gatctcgacaaagtggagcagggcgctctcgtgtggaacgggatgataaaagatttttac
ggcccgttcaaaaaacgcgtcgacgacgtgatggaaacgcaggaaagcgtcaaaggtttt
ctcgacgaaaaaaccgatatcatgtgcgaaaaatgcggaaagcccatggtcaaaaaactc
ggccgcttcggatactttctcgcctgttcgggatttcccgaatgccgcaacacgcgttcg
atcccgcttgcgaagtgcccgatgcccggctgcgacggagagatcgtcgcacggaaaacg
aagggaagaggcaaagaattttacggctgtacgaattacccgaagtgcaattttatttcg
catttcaaaccgatcgatcagtattgtccgaagtgcggatggttcctcgtcgaaaaatac
gacaaaaagaacggcacgtataaatcgtgcatcaatcccgactgcacctttttgcattcc
gccgacgatgctgcggcttttgaaaaagagtcggaaggtgctcccgagtctcggcaatag
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