Treponema socranskii subsp. buccale: HRI97_08095
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Entry
HRI97_08095 CDS
T08383
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk03420
Nucleotide excision repair
tsk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HRI97_08095
03430 Mismatch repair
HRI97_08095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsk03400
]
HRI97_08095
Enzymes [BR:
tsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HRI97_08095
DNA repair and recombination proteins [BR:
tsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRI97_08095
MMR (mismatch excision repair)
Other MMR factors
HRI97_08095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
UTD03021
LinkDB
All DBs
Position
complement(1775011..1777167)
Genome browser
AA seq
718 aa
AA seq
DB search
MTDARTDLSYMETLNPEQREAVEHSAGPLLILAGAGSGKTRVITTKIAYLIAEKKIPPES
ILAVTFTKKAANEMRSRAIALDDRARFAEIRTFHSFGAWFLRRYAAIANLSPSFTVYDDD
DAATLVMKAVPSLRRRQAELAAHRISLAKDYCLTPDDDLSAVDSTGELSAIYRAYEQRLS
ETGNADFGDLIMKPVRVMEENLAVREQMRFRFRVIMVDEYQDSNVAQFKLLQTLSGTAEG
SGTYVCVVGDDDQSIYRFRGAEVQNILTFRKKFPGTKIIKLVRNYRSTGKILAAADAVVK
NNEDRIGKTLKAERGAGKAPVLVYLPDQDAEAKFCAELIEKAHAEKETPYGDWAILYRTN
AQSLGFENEFLRRRIPYAVVGSLKFYEREEIKDTLAFLSLAANERDEIAFRRIVNKPSRG
VGEKTQEAIVSYAREKSIGFVEAAKACADDAGKKAKEGIREFCGAYDGIIKSFSEAERLS
HFVGKILDASGLLEYHRTQDEISGTQRAANMQELMNSASLYACTKDGLLQFLDSITLDRS
LETGDDGKGDAVTLITLHNTKGLEFPRVVITGLENGIFPRGDKTGSELEEERRLFYVGVT
RAQNELYVTSCARRRLYGRTEFMEPSVFLEEAESAFRVIGERPQKSDLQSGRSEAANGLS
EKWKRGCRVYHDDWGYGQIVSSDTSDDGEFVIAVQFESGAKKRFMPEYQSHSLMLVRD
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgcggacggatctttcgtacatggaaacgctcaaccccgaacagcgagag
gcggtcgaacattcggccggtccgcttttgattctcgcaggagccggaagcggaaagacg
cgcgtcatcacgacaaagatcgcctacctcatcgccgaaaaaaaaatcccgcccgaatcc
atactcgcggtaacctttacgaaaaaagccgcgaacgaaatgcgctcgcgcgcgatcgcc
ctcgacgacagagcgcgctttgcggaaatacgcacgtttcactcgttcggcgcgtggttt
ttgcgccgctatgccgctatcgcaaatctttctccctcgtttaccgtgtacgacgacgac
gatgcagccactctcgtgatgaaagccgttccgtcgctcaggcgccggcaggcagaactc
gccgcacatagaatttcgctcgcaaaggattactgccttacgccggacgacgatttatcc
gccgtcgattcgacaggagagctgtcggcgatctaccgcgcgtatgaacaaaggctttca
gaaacaggaaacgccgatttcggcgatttaataatgaagccggtgcgggtgatggaagaa
aatctcgccgtgcgcgagcagatgcgtttccgtttccgcgtcatcatggtcgacgaatat
caggattcgaacgtcgcccagtttaagcttttgcagacgctttcgggtacggcagaagga
agcggtacgtacgtgtgtgtcgtcggagacgacgaccagtcgatttaccgtttccgcggt
gccgaagtacaaaacattttgacgttccgcaaaaaattccccggcacgaaaattattaaa
ctcgtgcgcaattaccgctcgacgggaaaaattcttgccgccgcggacgccgtcgtaaaa
aacaacgaagaccgcatcggaaaaacgcttaaagccgagcgaggggcgggaaaggcgccc
gtgctcgtgtatttgcccgatcaggatgcggaagcgaaattttgcgcagagctcatcgaa
aaagcgcatgcggaaaaagagactccttacggcgattgggcgattttataccgtacgaac
gcgcagtcgctcggatttgaaaacgaatttttacgccggcggataccctacgccgtcgtc
ggttctttgaaattctacgagcgggaagaaattaaagacacgctcgcatttttatcgctt
gccgcgaacgagcgcgacgaaatcgcatttcgcagaatagtcaataaaccttcgcgcggt
gtgggagaaaaaacgcaggaggcgatcgtttcatacgcccgcgaaaaatcgatcggtttt
gtagaagcggcaaaagcctgcgctgatgatgccgggaaaaaagcgaaagaaggcatccgc
gagttttgcggtgcgtacgacggcattattaaatcgttttcggaagccgagcggctttcg
cactttgttggaaaaatactcgacgcgtcgggcctgctcgaatatcaccgtacgcaggat
gaaatatcgggtacgcagcgcgcggcgaatatgcaggaactcatgaacagcgcgtcgctg
tatgcgtgtacgaaagacgggcttttgcagtttctcgattcgatcacgctcgaccgttcg
ctcgaaacgggcgatgacggaaagggagatgccgtaacgctcatcacgctgcacaacacg
aaggggcttgagtttccgcgggtagtcatcacgggattggaaaacggtatctttccgcgt
ggcgataaaacgggaagcgaactcgaagaagaacgccgccttttttacgtcggcgtaacg
cgggcgcaaaacgaactctatgttacctcctgtgcccgccgccgcctgtacgggcgtacg
gagtttatggagccgagcgtttttctcgaagaggcggaaagcgcgtttcgtgtaattgga
gaaaggccgcaaaaatctgatctgcaaagcggccgctctgaagcggcaaacgggctttcg
gaaaaatggaagcggggctgccgagtttatcacgacgactgggggtacggacaaatcgtt
tcgtcggatacgagcgacgacggagaattcgttattgcggttcaatttgaaagcggtgca
aaaaaacgttttatgcccgaatatcaatcgcattctttgatgcttgtgcgcgattga
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