Treponema socranskii subsp. buccale: HRI97_08100
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Entry
HRI97_08100 CDS
T08383
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tsk
Treponema socranskii subsp. buccale
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsk03009
]
HRI97_08100 (rimO)
Enzymes [BR:
tsk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HRI97_08100 (rimO)
Ribosome biogenesis [BR:
tsk03009
]
Prokaryotic type
ribosomal protein modification factors
HRI97_08100 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UTD03022
LinkDB
All DBs
Position
complement(1777164..1778678)
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AA seq
504 aa
AA seq
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MTEFFIDEHGCAKNQVDGEIIISRLTALGFRQTFDASKAQIIIVNSCGFINPAKKESIDA
LLRAKKNYPDAKVLLAGCLAERYADVLKDSLPEADGIFGNGDLSKIDSVVRSLLAGKRPV
VTAEQRGISCGKRTMLLSYRNSVYVKITEGCSNRCTFCAIPIIRGSVRSRSADDIVDEIK
TLLLLGVYEINLIGQDLAAYGTGDGDDVFGTGRFPLPCIGEDGVNEGTEKLSALARLLKK
ISAVKGRFIVRLLYIHPDHFNRDIFPVMQKDPRIVPYFDIPFQSGDDEIIKAMNRKCTAK
EYVRLVRDIRSSFPAAAIRTTFLTGFPGETEEAFRSTQRFLSDIQSDWSGCFTYSREEDT
ASYAMKGRVPQKTALERKRVLEALQSEITEDRLKLRCGKEYDVLIEEVVAGEEGLAIGRA
WFQAPDVDGSFVVRYDRDDEAERSAVQCGNVVRVFADGVSGVDIDSRLASNLIINKKRSR
ASGGTAVSSPLLYASDFYDAGEGR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaattttttatcgacgaacacggctgtgcgaaaaatcaagtcgacggtgaaatc
atcatttcgcgtttgaccgctctcggttttcggcaaacattcgacgcgtcgaaagcacag
atcatcattgtcaattcgtgcggttttatcaatcccgccaaaaaagaatcgatcgatgcg
cttctccgcgcgaaaaaaaattatcccgatgcgaaagtgctgcttgcaggatgccttgcc
gaacgttatgcggacgtgttaaaagattctcttcccgaagcggacggcattttcggaaac
ggcgatctttcgaaaatcgattccgtcgtgcgctctcttcttgcgggaaagcgccccgtc
gtcacggcggagcagcgcggcatatcgtgcggaaaacggacgatgctgctttcgtatcgc
aattccgtatacgtaaagattacggaaggctgcagcaaccgctgtactttttgcgcgatt
ccgatcatccgcggctcggtgcggagccgaagcgcggacgatatcgtcgatgaaattaaa
acgctgctcttgctcggcgtatatgaaatcaatcttatcggacaggatttggcagcctac
ggtacgggagacggggacgatgttttcggtacggggcgctttccgctcccgtgcataggg
gaagacggcgtcaacgaaggtactgaaaaactttcggcgctcgcccgtttgttgaaaaaa
atctccgccgtcaaaggccgctttatcgtgcgcctcctctacattcatcccgatcacttc
aaccgcgatatctttcccgtcatgcaaaaggatccgcgcatcgttccgtatttcgatatc
ccgtttcaatccggcgacgacgaaattattaaagcgatgaatcggaagtgtacggcaaaa
gaatacgtgcgcctcgtgcgcgatatccgatcttcgtttcccgcggcggcgatcaggacg
acttttttgacgggctttccgggagagacggaggaagctttccgctccacgcagcgcttt
ctttccgatatacaaagcgattggtcgggctgctttacctacagccgcgaagaagatacg
gcctcctacgctatgaagggcagggtgcctcaaaagacagcgcttgagcggaagcgtgtg
cttgaagcgctccaaagcgaaatcaccgaagaccgtttgaagctgcggtgcggaaaagaa
tacgatgtactcatagaagaagtcgtcgcaggcgaagaaggccttgcgataggacgcgca
tggttccaagcgcccgacgtcgacggttcgttcgtcgtccgctacgacagggacgatgag
gctgaacggagcgccgtgcaatgcggaaacgtcgtgcgcgtttttgccgacggcgtgagc
ggcgtcgatatcgattctcgtctcgcctcgaatttaataataaataaaaaacggtctcgc
gcatcaggcggaacggcagtctcttcgccgcttttatatgcgagcgatttttacgatgcg
ggagagggccgatga
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