Treponema socranskii subsp. buccale: HRI97_08365
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Entry
HRI97_08365 CDS
T08383
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HRI97_08365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsk03400
]
HRI97_08365
Enzymes [BR:
tsk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HRI97_08365
DNA repair and recombination proteins [BR:
tsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HRI97_08365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UTD03067
LinkDB
All DBs
Position
1835079..1835969
Genome browser
AA seq
296 aa
AA seq
DB search
MLAAEKQAVWDLLKTASSSLCAYLPRAFAETPAFSDDAESAASAEASDRAAYVSASFGRA
GDFANKSAAAPSTQTSASFGRAGEFTDAGQADHASAESGRSGITLEEVAQKVASCSRCAL
SKKRTHTVPGMGVPHPAVLVVGEGPGAEEDAQGLPFVGPAGKLLDKMLEAISLSRDTNCY
IANIVKCRPPNNRTPLPEEADACISFLEAQIHILKPKLILAAGRTAAQNLLKTTEALSRL
RGAFRDYNGIPLLVTYHPSALLRDVSLKRPAWEDLKLFRAELLRLVPDYAKDFIKK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgcggaaaaacaagcagtatgggatctcctcaaaacggcatcgtcgtcgctg
tgcgcttacctaccgcgcgcttttgcggaaacacccgctttttccgacgacgccgaatct
gcggcaagcgcagaagcctccgatcgggcagcgtacgtttccgcatccttcggacgcgca
ggcgattttgcaaacaaatcggcagccgctccgtcgacgcagacttccgcatccttcgga
cgcgccggcgagtttacagacgcggggcaagccgatcatgcgagcgccgaatcggggcgg
agcggcatcacgctcgaagaagtcgcacaaaaagtcgcctcgtgttcgcgctgtgcgctt
tcaaaaaagagaacgcacaccgtaccgggcatgggcgttccccatcctgccgttctcgtc
gtcggcgaaggaccgggagcggaagaagacgctcaggggcttccctttgtcgggcctgcg
ggaaagctcctcgacaaaatgctcgaagcgatttccctctcccgcgatacgaactgctac
atcgcaaatatcgtaaaatgccgtccgccgaacaacaggacgccgcttcccgaagaagcg
gatgcatgcatttcctttctcgaagcgcagattcacatactgaaaccgaagctcatcctc
gcagcgggcagaacggccgctcaaaatttattaaaaacgactgaagcgctctctcgtctt
cgcggcgctttccgcgattacaacggcataccgctcctcgtcacttatcacccgagcgcc
ctgcttcgggatgtgtcgctcaagcggccggcgtgggaggatttaaaacttttccgcgcg
gagcttttgcgcctcgttccggactacgcaaaagattttattaaaaaatga
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