Treponema socranskii subsp. buccale: HRI97_09050
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Entry
HRI97_09050 CDS
T08383
Name
(GenBank) helix-turn-helix domain-containing protein
Organism
tsk
Treponema socranskii subsp. buccale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
Baculo_PEP_C
ATG17_like
HTH_38
DUF1664
ZnuA
ApoLp-III
Seryl_tRNA_N
Nuf2_DHR10-like
Crescentin
COG4_N
BLOC1_2
TetR_C_13
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
UTD03194
LinkDB
All DBs
Position
complement(1987053..1991324)
Genome browser
AA seq
1423 aa
AA seq
DB search
MDIVTILIAAAVAAVIAVVFRKLDSDNNSMEKVKRYADKRLEGFDEYFKKQDANIAGAGA
ELETKYLQATAGIKRLQKERDDFLAGADELQKYKNAIAAAEAKINGYDKSLASLAEMTAN
VEENLTRLKKEALIVEKLDARIDAQKNSIDEIEKRIPSIAGEFSQKNGEQLKLLGTKLLQ
EYDARSKELAEHIAELGKQADDALGRFQSEIEGVYDSAAKKADALEDTAFRHLSEQAQAR
SDAYVQTIEDKVAEIEAIVDERIDRAQKEIAAKTLSIDAAIGSRTAEMIKKYDAQYMQFT
DAYKKKLEDYGAKLNQQYALLSEKHTKKAGETDAALAAQYGALSEKYKELAAKTDAALGE
RYAALSESYKAKIAEIDNAFTQKTSETVAAFKDSTGNIVSNIKKQLSSLDEKYKQHIDEF
AKRYDEKIDSLQGKYSKQLESIDGKNDGRIASLDAKFDELFSKLNASYEEKASLLEKQAA
SIAAAYDEKEGSVAADINKRIDSLGSEYASQIEKIKKDLAASLSEAKATSDFISQNVSGN
AKSLEGLRAMLESEVKDIESRYNNLFANAVSAADEKEKAAFEKFSAVSGERLEKYQGQVQ
NKIDAFKTSLSETLVEISRRTDDSVRDAEDAIKELRAACDEAQKKADDAEPKLAEKIRLI
DERIEKFRAQSEAKLADFDKTITESIYKMAKQCEQQQSDALNAIDSQFGSYKKDLAYQFS
RLETSGKDIDSLEANLRKAMDEIRKRVLSDFDSFTAGQQKAQKEFSDSVQADSEALQSQL
QALEQTVDALKESALGNVSAKLKDFEEGIDDDLKTRSDKIAEDLAVWKNSFDGKLALFTD
DYENDRRALEMKYGEDLKAKLDFLQEKNDEQLARIASGINEANGSLSERIDGIAKTIDGF
EEETRERVNKTQTISDEYLKTVAAQYEAKMNDELERVQAELSDGLKKIEEAVSDQQETSA
STIDAARSEVNTWKQQLKQQLDESRAVFKDQLDTLKSSSQNKIDEARESLLADFQNYSAD
MKEQQAALSSSVSELQAKTDESLDMYESRSEEMLARLQSMYEEMLKDTESRVSRQSADST
KALSELRGKINSFESQASENQAKFVLKMQSDQDEMQSRLGELNREIQNVRSQMQLYERAE
AMKKSLDERISALDEDFSRLASYNETALSLADNFKALHKMYDDINGRLKEFDVQRARVDS
IGQKYEKMVNLSGSIDEKISGLQTSYDELQNFEVAVRDFQEKLHSLTGSYDRLEQKQTII
ERVNEDVNRSFDSLKTLEDKLKQCTRQTESLPKEIKDVQKDVDKLLKSGPKLAQAVAKLE
SLDAILDEADKRMDALTSARQGIGRSEARLEELKTDIESKFKLLNQLTKKDLEKRPAKED
KRLSPQDRDNIKQLKQQGWTVKEIARSMKRTQTEIEMVLEMPE
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
gtggatatcgtcacaattttgatagcggctgctgtcgctgcggtaatcgccgtcgtattc
agaaaactggacagcgataacaactcgatggaaaaagtcaagcggtatgccgataagcgg
ctcgaaggctttgatgagtattttaaaaaacaggatgcgaatatagcgggtgcgggcgcg
gagctcgaaacgaaatatcttcaggcgactgcaggaatcaaacgcctccaaaaagaacgc
gacgattttttggcaggcgccgacgagctgcaaaaatataaaaatgcgatcgcggccgca
gaagcgaaaatcaacggctacgataaatcgctcgcctcccttgcggagatgacggcgaac
gtcgaagaaaatttgacgaggctgaaaaaagaagcgctcatcgtcgaaaaactcgacgcg
cgtatcgatgcgcaaaaaaactcgatcgacgaaatcgaaaagagaattccgagtattgcc
ggagagttttcgcaaaaaaacggcgaacagctgaaactgctcggaacgaaattgctgcag
gaatacgatgcgcgctcgaaggaactcgccgaacatattgccgagctcggaaagcaggct
gacgatgcgcttggccgctttcaatcggagatagaaggcgtatacgattcggcggcaaaa
aaagcggatgcgcttgaagataccgcattccgtcatttgagcgaacaggcgcaggcgaga
agcgatgcatacgtgcagacgatcgaagacaaggtcgccgaaatcgaagccattgttgac
gagcgtatcgatcgggcgcaaaaagagatcgcggccaaaacgctttcaatcgatgctgcg
atcggaagccgtaccgcagaaatgataaaaaaatacgacgcacagtatatgcagtttact
gatgcgtataaaaagaagcttgaagattacggtgcaaaactcaatcagcagtatgcgctc
ctttccgaaaagcacacgaaaaaagcaggcgaaacggacgctgctcttgccgcgcagtac
ggagcgctttcggaaaaatataaagagctcgcggcgaaaacggacgcagcgctcggcgag
cggtacgccgctttgtccgaaagctataaagcgaaaattgccgaaatcgataacgccttt
acgcaaaaaacgtccgaaacggttgcggcgtttaaagattcgacgggcaatatcgtttcg
aatattaaaaagcagctttcttctctcgatgaaaaatacaaacagcatatcgacgaattc
gcaaagcgttacgacgaaaaaatcgattcgctgcagggaaaatactcgaagcagctcgaa
tcgatagacggaaagaacgacggacgtatcgcttcgctcgatgcgaaattcgatgagctc
ttttcaaagctgaacgcgtcatacgaagaaaaagcttcgttgcttgaaaaacaggcggca
tcgatcgcggcggcatacgacgaaaaagaaggatcggttgcagccgacatcaataaacgc
atcgattctctcggctcagaatacgcttcgcagatcgaaaaaatcaaaaaagatcttgcg
gcatcgctttcggaagcgaaggcgacgtccgattttatttcgcaaaacgtttccggaaac
gcaaagagccttgaaggactgcgtgcgatgctcgaatcggaagtgaaagatatcgagtcg
cggtacaacaacctctttgcgaacgccgtttccgccgccgacgaaaaggaaaaggctgcg
ttcgaaaaattctcggccgtttcgggtgaacgtctcgaaaaatatcaggggcaagtgcaa
aataaaatcgacgcgttcaaaacttctctttccgaaacgcttgtcgaaatttcccgccgc
acggacgattcggtacgcgatgccgaagatgcgatcaaagagttgcgcgcagcctgcgac
gaagctcagaaaaaggccgatgacgcggagcccaaacttgcggaaaagattcggctcatc
gatgaacggatcgagaaattccgcgcgcagtcggaagcgaaacttgcggactttgacaaa
acgatcaccgaatcgatttacaaaatggcgaaacaatgcgaacagcagcaatccgatgcg
ctcaatgcgatcgattctcagttcggttcgtataaaaaagatttggcgtatcagttttcg
aggctcgaaacgtcgggcaaggatatcgattcgcttgaagcgaatttgcgcaaagcgatg
gacgaaatacgaaaacgcgtactttccgatttcgattcgtttaccgcgggtcagcaaaaa
gcgcaaaaggaattttcggattccgtacaagcggattccgaagcgctgcaatcgcagctg
caagctctggaacagaccgtagatgcgctcaaagaatcggcgctcggaaacgtaagtgca
aagttgaaagatttcgaagaaggcatcgacgacgatttgaaaacgcgcagcgataaaatc
gccgaagatttggcggtgtggaaaaattcgtttgacggaaaactcgcgctgtttacggat
gattatgaaaacgaccgccgtgcgcttgaaatgaagtacggcgaagatttgaaggccaag
ctcgattttcttcaggaaaaaaacgacgaacagcttgcccgcatcgcttccggcatcaat
gaggcgaacggttcgcttagtgagcgtatcgacggcattgcaaagacgatcgacggtttt
gaagaagaaacgcgggagcgtgtaaacaaaacgcagacgatttcggacgagtatttaaaa
acggtcgccgcccaatacgaagcgaagatgaacgacgagctcgagcgggtacaggcggaa
ttgagcgacggattgaaaaaaatcgaagaagccgtaagcgatcaacaggagacgagcgcg
tccacgatcgatgccgcacgttccgaagtgaatacgtggaaacagcagcttaaacagcag
ctcgacgaatcgcgcgccgtttttaaagatcagctcgatacgctgaagtcgtcttcacaa
aataaaatcgacgaagcgcgcgaatcgcttctcgcggatttccaaaattattccgcggat
atgaaagagcagcaagccgctctttcttcttcggtcagtgagctgcaagcgaaaaccgac
gaatcgctcgatatgtatgagtcgcgttccgaagaaatgcttgcacgtctgcaatccatg
tacgaagaaatgctcaaagataccgagtctcgtgtgagcagacagagcgccgattctacg
aaagcgctgagcgagcttcgcggaaaaatcaattcgtttgaatctcaagcgagcgaaaat
caggctaagttcgtgcttaaaatgcaaagcgatcaggatgaaatgcaaagccgtttgggt
gagctgaatcgtgaaatccaaaacgtgcgttcgcaaatgcagctctatgaaagagcggaa
gcgatgaaaaaatcgttggacgaacgtatttcggctctcgacgaagacttcagccggctc
gcatcgtacaatgagacagctctttctcttgccgacaatttcaaagcgctgcataaaatg
tacgacgatataaacggacgtctgaaagaattcgatgtgcaaagagcgcgtgtcgattcg
atcgggcaaaaatacgaaaagatggtaaatctctcagggtctatagacgaaaagataagc
ggtttacagacgtcgtacgatgagcttcaaaactttgaagttgcggtgcgtgattttcag
gaaaagctgcattcgcttaccggttcttacgacaggcttgaacaaaaacagacgataatc
gagcgtgtgaacgaagacgtcaaccgatcgttcgattctttgaaaacgcttgaagacaaa
ttgaagcagtgcacacgtcaaaccgaatcgcttcccaaagaaatcaaagatgtgcaaaaa
gacgtcgacaaacttttgaagagcgggccgaagcttgctcaggcggtggcgaagctcgaa
tctctcgatgcgattctcgacgaagccgacaaacgcatggatgcgctcacgtcggctcgg
cagggtatcggcagaagcgaagcgcgccttgaagagcttaaaaccgatatcgaatcgaag
ttcaagctgctcaatcagctgacaaaaaaagatttggaaaagcgtccggcaaaagaggat
aaacgcctgtcgccgcaggacagggacaatatcaaacagcttaaacagcagggatggacg
gtaaaagaaatcgcgaggtcaatgaagcgcacgcagacggaaatcgaaatggtgctcgag
atgcccgaataa
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