Treponema socranskii subsp. buccale: HRI97_09080
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Entry
HRI97_09080 CDS
T08383
Name
(GenBank) 2-hydroxyacyl-CoA dehydratase
Organism
tsk
Treponema socranskii subsp. buccale
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2229
BcrAD_BadFG
FGGY_N
DEDD_Tnp_IS110
ROK
Hydantoinase_A
RRXRR
Med26
FGGY_C
Motif
Other DBs
NCBI-ProteinID:
UTD03200
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All DBs
Position
complement(1997085..2001644)
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AA seq
1519 aa
AA seq
DB search
MAVTQSALHNELLPIRIGIDVGSTTVKIAVLDDDDTLIYSAYERHRADIRSTIISVVNKA
LDFLEKNIAGGAERAVTVKVTGSGGLSVSQWLSVPFIQEVIAATTAVKTIIPLTDVVIEL
GGEDAKITYFKGGVEQRMNGTCAGGTGAFIDQMAALLETDADGLNTLAKDAHTIYPIAAR
CGVFAKTDVQPLINEGARREDIAASIFQAVVNQTISGLACGKPIRGHVAFLGGPLHFMDQ
LRERFIVTLKLKDDEIIVPENSQLFVAQGCAYSADRRYSGMPDFAFPTVADFRSSLSNLV
GAELSEVQRLEPLFKSQSDLDEFVNRHAKEKAKRGDLDSVKGPVFLGLDAGSTTTKAVLI
DQEGRILWDFYAANAGNPVDLAVKVLKGLYARLPKDVYIARAVSTGYGEALFQAALNVDA
GEVETITHFRAADFFVPGVEFLLDIGGQDMKCLRMKDGAIVSIQLNEACSSGCGSFLDNF
ARTMGMDVREFSKRALLAEKPVDLGSRCTVFMNSRVKQAQKEGASVADISAGLSYSVIKN
ALFKVIKLRKASDIGTKVVVQGGTFNNDAVLRAFENISGVHVFRPDVAGLMGAYGSALIA
YDQWLDLSAPKPEEGPDAPRHEIRSGIATLSDLESFSVKLDLRRCGKCQNNCLLTINTFS
TGGFERKFVTGNRCERGAELDGNVLDASNKKATNIEAGKEAKLPNMFAWKYARLFNDYVP
LRAEDAPMGEVGIPRVLNMYENYPLWFTFFTSLGFRVRLSSRSSRTVYEKGLETIPSESV
CYPGKISHGHVESLLQQGIKFIFYPCAPYEQQEDSTAGNHYNCPIVTSYPEVLRNNIDSL
RQDTSILYMDPFLPIYDKDRLAVRLAEELIPHFPELTKERISRAVDEAWAEQEKFRRDTE
EKGVEAIEETIRRGANGIVLAGRPYHLDPEINHGIPELINDLGLAVFTEDSVAHLGSIER
PLRIIDQWTYHNRLYRAASFVAGMPNLELVQLTSFGCGLDAVTADQVDEIMRAKGRMYTL
IKIDEGANLGAVRIRIRSLIAAVKERERRHQKPVVKSAAYRKQVFTKEMKYTHTIIAPQM
SPIHFRLFQKAFEYSGYKFVVLDAVDPHAVDIGLRFVNNDACYPSILVTGQMIAALESGK
YDLNHTSLIISQTGGGCRATNYIGFIRRALNDAGWGHIPVLSLNANGLEQNPGFKVTLPL
LERLIMSSMIGDVLMRVLYRTRPYEKVQGSANALYEKWNGRAEIQLRSLSVRGFHKLVKN
IIDDFDALPLLPIKKPRIGIVGEILVKFHPTANNQIVDTIEREGAEAVMPDMVNFFLYTF
STGIFRHEKLAFPKKTETIARLLVWFTESFRKPIEKYLRKSRRFDAPETIYEQMKSVDDI
VQLGNITGEGWFLTAEMVELIKTGVPSIACVQPFACLPNHVTGKGMIKELRRRFPGANIS
AIDYDPGSSEVNQLNRLKLLLSNAPIGKHPDENEEGMIVMSDGSLVKPEIRFAEGAVSFT
DFEPVAAGNRPPVLAPVHA
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atggcagtaacacaaagtgctttacataatgaattgcttccgatccgtatcggcatcgat
gtcggctcgacgaccgtaaagatcgccgtactcgacgacgacgatacgctcatatacagc
gcctacgaacgtcaccgtgccgatatccgcagtacgatcatatccgtcgtaaacaaagct
ctcgattttctcgaaaaaaatatcgcgggaggagcggagcgggcggttaccgtcaaagtg
accggttcgggaggattgtccgtgtcgcagtggctttccgttccgtttattcaggaagtt
atcgcggcgacgactgccgtcaaaacgattataccgctcaccgatgtcgtcatcgaactc
ggcggcgaagatgcgaagattacgtattttaaaggcggggtcgagcagcgcatgaacggt
acgtgcgcgggcggtaccggcgcctttatcgatcagatggccgctctccttgaaacggac
gccgacggtctcaatacgcttgcaaaagacgcgcacacgatctacccgattgccgcacgt
tgcggcgtttttgcgaaaaccgacgtgcagccgctcatcaacgaaggcgcccgccgcgaa
gatatcgccgcatccatttttcaagccgtcgtcaaccaaacgatttccggtcttgcgtgc
ggaaaaccgatacgcggtcatgtcgcgtttttgggcggcccgcttcactttatggatcag
ctgcgtgaacgctttatcgttacgctgaaattaaaagacgacgaaatcatcgtcccggaa
aattcccagcttttcgtcgcgcagggctgcgcgtattcggccgaccgccgctattcgggt
atgccggattttgcttttccgacggttgccgatttcagaagcagcctttcgaacctcgtc
ggtgcggaactgagcgaagtgcagcgcttggagccgctgtttaaaagtcaaagcgatctc
gacgaatttgtcaatcggcatgcaaaagaaaaagcgaagcgcggtgatttggattctgtc
aaaggtcctgtttttctcggcctcgatgcgggttccacgacgaccaaagccgtgcttatc
gatcaggaaggaaggatcctgtgggatttttatgcggcgaacgcgggcaatcccgtagac
cttgccgtcaaagttttaaaaggcttgtatgcgcggcttccgaaagacgtgtacatcgcg
cgtgcggtttcgaccggttacggagaagcgctctttcaggcggcgctcaacgtcgatgcg
ggcgaagtcgaaacgataacgcatttccgcgcggcggactttttcgtgccgggcgtcgaa
tttttgctcgacatcggcgggcaggatatgaaatgccttcgcatgaaagacggcgccatc
gtttccattcaattgaacgaagcctgctcttccggctgcggcagctttctcgacaacttt
gcgcgcacgatgggtatggatgtacgcgagttcagcaaaagggcgctgctcgccgaaaag
cccgtcgacttgggaagccggtgcaccgtatttatgaacagccgcgtcaaacaggcgcaa
aaagaaggcgcatccgtcgccgacatctccgcgggtctttcgtattcggttattaaaaat
gcgcttttcaaagttattaaattgcgcaaggcgagcgacatcggcacgaaagtcgtcgtg
cagggcggtacgttcaacaacgacgccgtgctgcgcgcgttcgaaaatatttcgggcgtg
cacgtattccgtcccgatgttgcaggtctcatgggcgcttacggttcggcgctcatcgcc
tacgatcagtggctcgacctttcggctccgaagcccgaagaagggccggacgctcctcgt
catgaaatccgttcgggcatcgccacgctttcggatcttgagtcgttcagcgtcaagctc
gatctccgccgctgcggcaaatgccaaaacaactgccttttgacgatcaacacgttctct
accggcggcttcgagcgaaagttcgtaacgggcaaccgctgcgagcgtggagccgaactc
gacggcaatgtcctcgacgcgagcaataaaaaagcgacgaatatcgaagcgggaaaagaa
gcgaagcttccgaatatgttcgcgtggaaatacgcgcggctttttaacgattacgttccg
ctccgcgccgaagatgcgccgatgggagaagtcggtatcccgcgcgtactcaatatgtac
gaaaattatccgctgtggtttacgtttttcacttcgctcggtttccgcgtgcgcctttct
tcccgatcgtcgcgtacggtttacgaaaaagggcttgaaacgattccgtcggagtcggtg
tgctatccgggaaagatttctcacggacacgtcgaaagccttttgcagcagggcataaaa
tttattttctatccctgcgcgccctacgaacagcaggaagattcgactgcgggcaatcac
tataattgtcccatcgtcacaagctatcccgaagtgctgcgcaacaatatcgattcgctg
aggcaggacacttccattttgtacatggatccgtttttgccgatttacgataaagaccgt
ctggccgtgcgcttggccgaagagcttatcccgcactttccggaattgacgaaagagcgc
atctcgcgcgcggtcgacgaagcgtgggcggaacaggaaaagtttcggcgcgatacggaa
gaaaagggtgtcgaagcgatcgaagaaacgatcaggcgcggcgcaaacggcatcgtgctc
gcaggccgtccgtatcacctcgatcccgaaatcaatcacggcattcccgaactgataaac
gatttgggacttgcggtctttaccgaagacagcgtcgcgcatttgggcagcatcgagcgg
ccgcttcgcatcatcgatcagtggacgtatcataatcgattataccgggcggcttccttt
gtcgccggcatgccgaatctcgaactcgtgcagctcacgagtttcggctgcgggctggac
gcggttacagccgatcaggttgatgaaatcatgcgcgcaaagggacgcatgtatacgctt
attaaaatcgatgaaggtgcgaacttgggcgcggtacgcatccgcatccgctcgctcatc
gccgcggtaaaggagcgcgagaggcggcatcaaaagcccgtcgtaaagagcgccgcgtac
cgaaagcaagtgtttacgaaagagatgaagtacacgcacacgatcatcgctcctcagatg
tcgccgatccacttccgcctctttcaaaaagccttcgaatattccggctataaattcgtc
gtactcgatgcggtcgatccgcacgccgtcgacataggtttgagatttgtcaacaacgac
gcgtgttatccgtcgatcctcgtcacggggcaaatgatagccgctctcgaatcgggcaaa
tacgatttgaatcacacatccctcatcatttcgcagacgggaggcggctgccgcgcgacg
aattacatcggctttatcaggcgcgctttaaatgatgcgggctggggtcacatccccgtc
ctttcgctgaacgcgaacggtctcgaacaaaatccgggatttaaagtgacgcttcctctc
ctcgaacggctcatcatgagttcgatgataggagatgtgctcatgcgcgttttgtaccgg
acgcgcccttacgaaaaagtgcagggctcggcgaacgcgctgtacgaaaaatggaacggc
agggcggagattcagctgcgctccctttcggtccgcggttttcacaaacttgtcaaaaac
atcatcgacgatttcgatgcgctgccgcttttgccgatcaaaaaaccgcgcatcggcata
gtcggagaaatcctcgtcaaattccatccgacggcgaacaatcagatcgtcgatacgatc
gagcgcgaaggcgcggaagcggttatgcccgacatggtgaactttttcctgtatacgttt
tcgaccggcattttccgtcacgaaaaactcgcgttcccgaaaaagaccgaaacgattgcg
cgccttctcgtgtggtttacggagtcgttcagaaagccgattgaaaaatatctccgcaaa
agccggcgcttcgacgcgcccgaaacgatatacgagcagatgaaaagcgtcgacgacatc
gtccagctcggaaacatcacgggcgaaggctggttcctcacggcggagatggtcgaactc
atcaaaacgggagtgccgagcatcgcgtgtgtgcagccctttgcctgtcttccgaatcac
gttaccggaaagggtatgataaaagagctccgccggcgctttcccggtgcgaatatcagc
gcgatcgattacgatccgggttcgagtgaagtcaatcagctcaaccgtttaaagcttttg
ctgtcgaacgcgccgatcggaaagcatcccgacgaaaacgaagagggtatgatcgtgatg
agtgacggctctctcgtaaagcccgaaatacgttttgccgaaggggccgtaagctttacc
gatttcgaacccgttgcagcagggaaccgtcctccggtgcttgcgccggtgcatgcatga
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