Treponema socranskii subsp. buccale: HRI97_09160
Help
Entry
HRI97_09160 CDS
T08383
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HRI97_09160 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsk03400
]
HRI97_09160 (uvrA)
DNA repair and recombination proteins [BR:
tsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRI97_09160 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HRI97_09160 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_15
AAA_16
AAA_21
nSTAND1
AAA_23
AAA_25
nSTAND3
RsgA_GTPase
NACHT
BCA_ABC_TP_C
cobW
Viral_helicase1
DnaJ_CXXCXGXG
DUF7575
Sgf11
YhfH
Motif
Other DBs
NCBI-ProteinID:
UTD03916
LinkDB
All DBs
Position
complement(2022484..2025381)
Genome browser
AA seq
965 aa
AA seq
DB search
MAPVTGEKISIRGAREHNLQNVDIDLPRNKLVVLSGLSGSGKSSLAFDTLFAEGQRRYME
SLSSYARQFLGTMDKPDVDLIEGLSPAISIEQKSTNKNPRSTVGTITEIYDYYRLLFARI
GHAHCPNCGREIAEQSIDQIIDTMMSWPEGTKVQILSPVVRGKKGEHQKVFEDARKAGFA
RARVDGVMADLEDTVKLDKQKKHTIEIVVDRIIISPSVRKRLADSVETALKSSNGTIIVT
KKNDAAGGEASSEAEVFFSQKNACPSCGISIPELQPRLFSFNNPFGACPECTGLGEKMEF
DLNLMIPDESKSFDEWAILPYNPSSAWNTARMQGLADAYKFTLSTPIEKLTKKQRDALLY
GTKDAIHWEYEKQSGEGYSVYDQAWPGLFDDMKRRYTEAWGDQMKTNLEKYMSHRECAAC
RGKRLRPEALGVTVGGKNIWEITELSVLDSIDFFDKIRLTKSESEIASQVLKEIRSRLRF
LKNVGLDYLTLERAAETLSGGEAQRIRLATQIGSALVGVMYILDEPSIGLHQRDNQKLID
TLTYLRDAGNTVIVVEHDEQTLRTADYLVDLGPAAGVHGGRVVAAGTPEQVSRVAESVTG
QYLAGKLRMAIPAKRRGGNGSCIELTGAAEHNLKNVSVKIPLGTFTCITGVSGSGKSTLL
SDVLYPALSNKLMRTKYSVGKFEKIEGVSNIDKVINIDQSPIGRTPRSNPATYVGLFSGI
RDLFASLPEAKARGYGPGRFSFNVKGGRCENCQGAGTIVIEMNFLPDVYIQCDVCGGKRF
NKETLDVTYKGKNINDVLNMTIEEACDFFAGIPHVARKLETLKSVGLGYIRLGQSALTLS
GGEAQRVKLATELARTSTGKTMYILDEPTTGLHFADVMLLMEVIQRLVDAGNTVIMIEHN
LDVICQADWIIDLGPEGGFRGGNVIATGTPEEVAEVKQSYTGSYIKEMLEREKRRPAVKK
STRKK
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atcgcgcccgtcacgggcgaaaaaataagtatcagaggcgcgcgcgagcacaatctgcaa
aacgtcgacatcgatttgccgcgcaataaactcgtcgtgctttccggtctttcaggttcg
ggaaaatcttctctcgcgttcgacacgctctttgccgaagggcagcggcgttatatggaa
agcctttcgtcgtacgcgcgccagtttttgggtacgatggacaaacccgacgtcgatttg
atcgaagggctttcgcctgcgatttcgatcgaacaaaaatcgacgaacaaaaacccccgt
tcgacggtcggcacgatcaccgaaatctacgattattatcgccttctctttgcacgcatc
gggcatgcacactgtccgaattgcggacgcgaaatcgccgaacagtcgatcgaccaaatc
atcgacacgatgatgagctggccggagggtacgaaggtgcagatactttcgccggtggtg
cgcggaaaaaaaggcgaacatcaaaaagtgttcgaagacgcgcgaaaggcgggttttgcg
cgcgcgcgggtggacggcgttatggccgatttggaagatacggtcaaactcgacaagcaa
aaaaaacacacgattgaaatcgtcgtcgacagaattatcatttcgccttccgtgcgcaag
cgtttggcggattcggttgaaaccgcgctcaaaagttcgaacggtaccatcatcgtcacg
aaaaaaaacgatgctgcaggcggggaagcatcttcggaagccgaagtgtttttttcgcaa
aagaacgcgtgcccctcctgcggtatttcgattcccgaactgcagccgcgcctcttttca
tttaacaatcctttcggtgcttgtcccgaatgcaccggtttgggcgaaaagatggaattc
gatttgaatctgatgattcccgacgaatcgaaatctttcgacgagtgggctatccttccg
tacaatccttcgtccgcgtggaatacggcgcgcatgcaggggctggcggacgcgtataaa
tttacgctgtcgacgccgatcgaaaaattgacaaaaaagcagagagatgcgcttttgtac
ggcacgaaagacgctatccactgggaatacgaaaagcagagcggggaagggtattctgtg
tacgatcaggcgtggccgggtctcttcgacgatatgaagcggcgctacacggaagcgtgg
ggcgaccagatgaagacgaacctcgaaaaatacatgtcgcaccgcgaatgcgccgcgtgc
cgcggaaaaagactgcgccccgaagcgctcggagtgacggtcggcggaaaaaatatttgg
gaaatcaccgaactttccgtcctcgattcgatcgattttttcgacaagatacgattgacg
aaatccgaaagtgaaatcgcgtcccaagttttaaaagagatacgctcgcgcctgcgcttt
ttgaaaaacgtcggactcgattacctcacgcttgagcgtgcggcggaaacgctgtcggga
ggcgaagcgcagcggatcaggcttgccacgcagatcggaagcgccctcgtcggcgtcatg
tacatacttgacgaaccgtcgatcggactgcatcagcgggacaatcaaaaactgatcgac
acgctgacatatctccgcgacgcgggcaatacggttatcgtcgtcgaacacgacgaacag
acgcttcgaaccgcggactacctcgtcgacttgggacctgcggcgggcgtgcacggaggc
cgcgtcgttgcggcgggaacgcccgaacaggtttcgcgcgtcgccgaaagcgttacgggg
caatacctcgcgggaaaattgcgcatggcgattccggcaaaacggaggggtggcaacggg
agctgtatcgaacttacgggagcggccgagcacaatctgaaaaacgtttccgtaaagatt
cccctcggcacttttacgtgcataacgggcgtttcgggatccggcaaatcgacgctgctt
tccgacgtgctctatcccgcgctcagcaataagcttatgcgcacaaaatactctgtcggc
aaattcgaaaagatcgaaggcgtttcgaatatcgacaaagttatcaatattgatcaaagc
cccatcgggcgcacgcctcggtcgaaccccgcgacatacgtcgggcttttcagcggcata
cgcgatctctttgcatctcttcccgaagcgaaagcgcgaggctacggcccggggaggttc
agctttaacgtaaaaggcggcaggtgcgaaaattgtcaaggagcggggactatcgttatc
gaaatgaattttttgcccgacgtgtacattcagtgcgacgtctgcggcggaaagcgattt
aacaaagagacgctcgacgtaacgtataagggcaaaaacatcaacgacgtgctcaatatg
acgatcgaagaagcgtgcgatttttttgcgggcatcccgcacgtcgcgcgcaaactcgaa
acgctgaagtcggtcggtctcggctatatccggctcggacagtcggcgcttacactttcc
ggcggagaagcgcagcgcgtaaagcttgcgaccgaactcgcgcgcacttcgacgggcaaa
acgatgtacatactcgacgaaccgacgaccggtttgcactttgccgacgtcatgctgctc
atggaagtgattcagcgcctcgtcgacgcgggcaatacggtgatcatgatcgagcacaac
ctcgacgttatctgccaagccgattggataatcgatttggggccggaaggcggtttccgc
ggcggcaacgttatcgcgacagggacgcccgaagaagtcgccgaagtcaagcagtcgtat
acgggttcttatatcaaagagatgctcgaacgtgaaaagcgccgtcccgccgtaaaaaaa
tcgacacggaaaaaatga
DBGET
integrated database retrieval system
