Treponema socranskii subsp. buccale: HRI97_12070
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Entry
HRI97_12070 CDS
T08383
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
tsk
Treponema socranskii subsp. buccale
Pathway
tsk00521
Streptomycin biosynthesis
tsk00523
Polyketide sugar unit biosynthesis
tsk00525
Acarbose and validamycin biosynthesis
tsk00541
Biosynthesis of various nucleotide sugars
tsk01100
Metabolic pathways
tsk01110
Biosynthesis of secondary metabolites
tsk01250
Biosynthesis of nucleotide sugars
Module
tsk_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HRI97_12070 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HRI97_12070 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HRI97_12070 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HRI97_12070 (rfbB)
00525 Acarbose and validamycin biosynthesis
HRI97_12070 (rfbB)
Enzymes [BR:
tsk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HRI97_12070 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
UTD03735
LinkDB
All DBs
Position
2681654..2682745
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AA seq
363 aa
AA seq
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MARKLTNIMVTGGAGFIGCNFIRFLLGNESGFAGRVVNVDCLTYAGNLESLSDIETEYGS
SRYFFEKADICDRAEIERILKQYDIDTIVHFAAESHVDRSILGPETFIKTNVMGTFTLLD
AARNFWQKPDGVMREDVLFHHISTDEVYGSLGATGAFTETTPYDPRSPYSASKASSDHIA
SAYSHTYGLPLTLSNCSNNYGPYQFPEKLIPLMIANIRDGKELPVYGEGKNVRDWIYVED
HNRAVWLILQKGEAGQKYNIGGENELQNIELLQKLIELTAGELHKDVADVEKTIVHVKDR
PGHDLRYAIDCTKIKTELGWQRKVSFDEGLRRTVSWYLSHRDWIDHILSGEYKTWIAENY
TKR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaaattaacgaatatcatggtcaccggcggtgccggttttatcggctgtaat
tttattcgctttttgctcggaaacgaaagcggttttgccgggcgcgtcgtcaacgtcgat
tgtctcacttatgcgggcaacctcgaaagcctttccgacatcgaaaccgagtacggctcg
tcgcgctatttttttgaaaaggccgacatctgcgacagggcggaaatcgagcgtatttta
aaacaatacgatatcgacactatcgtgcactttgcggcggaaagccacgtcgaccgttcc
attttgggaccggaaacctttattaaaacgaacgtcatgggaacctttacgctgctcgat
gccgcacgcaatttttggcaaaagccggacggcgtgatgcgcgaagacgtgctctttcat
cacataagcaccgacgaagtgtacggctcgctcggagcgacgggagctttcaccgaaacg
acgccctacgatccgcgctcaccgtattcggcgagcaaagcgtcgagcgatcacatcgcg
tcggcatacagccacacgtacggtttgccgcttacgctttcgaactgctcgaacaattac
ggaccctatcagtttcccgaaaaactcattcccctcatgatcgcaaatatccgagacgga
aaggagcttccggtatacggcgagggtaagaacgtgcgcgattggatttacgtcgaagat
cacaaccgcgcggtttggcttattttgcaaaaaggcgaggccggacaaaaatacaatatc
ggcggagaaaacgaactgcaaaatatcgaactgctgcaaaaactcatcgagcttacggcg
ggcgaactgcataaagacgtcgccgacgttgaaaagacgatcgtccatgtaaaagaccgc
cccggacacgacctccgctacgcgatcgactgcacgaaaatcaaaaccgaactcggctgg
cagcgtaaagtttcgttcgacgaaggacttcgccgtacggtgtcgtggtatctttcgcat
cgggattggatcgatcatatcctctccggcgaatacaaaacctggattgcggaaaattac
acgaagcggtga
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