Treponema socranskii subsp. buccale: HRI97_12565
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Entry
HRI97_12565 CDS
T08383
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tsk
Treponema socranskii subsp. buccale
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsk03032
]
HRI97_12565 (gyrA)
03400 DNA repair and recombination proteins [BR:
tsk03400
]
HRI97_12565 (gyrA)
Enzymes [BR:
tsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HRI97_12565 (gyrA)
DNA replication proteins [BR:
tsk03032
]
Prokaryotic type
DNA Topoisomerases
HRI97_12565 (gyrA)
DNA repair and recombination proteins [BR:
tsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HRI97_12565 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HIP1_clath_bdg
TPD52
YlbD_coat
Motif
Other DBs
NCBI-ProteinID:
UTD03825
LinkDB
All DBs
Position
complement(2799194..2801665)
Genome browser
AA seq
823 aa
AA seq
DB search
MEEIQTPEGGTLIPIPIDAEVKQAYIDYSMSVITSRALPDVRDGLKPVHRRILYAMDELG
LRSSGATRKCAKIVGDVLGKFHPHGDASVYDAIVHLGQDFYLRYPVITPQGNFGTIAGDP
AAAYRYTEAKMAKLAEEMVADIDKDTVDFVPNFDETAKEPTVLPSKLPYLLVNGASGIAV
GMATNMPPHNLREIASAVSAYIDNPDITIEELSKIVRGPDFPTGGIIFGRGGIKQAYKTG
RGKIIVRGRFNIETAKGGRESIIFTEVPYGVNTKVLCERIGELARNKDIDGITGINDESS
DRTGMRIVIDLKRGAITKIVLNQLFTKTALQSNFGVINLALVGGRPQILTLKQLVQHFVE
HRDQVVTRRTQFELNKALAREHILQALIVAINNIDEVIKIIRASRDTEEAKNNLKKRFDF
DDVQAQAIVDMQLKRLTHLEIDDLKKELAELEALIAHLRDLLAHHEKLLALVKTETNELA
EKYGDDRRTDIVADEIEEINVEDMIKQEDVVILVSKLGYIKRLAATQYKSQGRGGKGSFS
ANLVEDDYINQIFIASTHDCIMFITNEGKAYWIKVHEIPEASKMSRGSHIKSLLAVSADE
EITTTVTVKEFSGDNYVLMATTNGVVKKTALSDFANAKTKGVIAIRLDGGDKLVSAILTA
GKNDVFFVSRRGKALRISEDDVRPMGRASRGTRGMKLAEGDEIAAAVRAEAGKSIMLVTE
KGFGKRINPEDFKSHGRGTGGQRCYGNTEERGEIIGALAVADGDEVLCITSQGKTLRVAA
GDIKEQGASSTGVSVVKVDAPDYLVGIDRVADEEADKDDTKNT
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggaagagatacaaacaccggaaggcggtacgctgataccgattcctatcgatgcggaa
gtcaaacaggcgtatatcgattattcgatgtcggtcatcacgagccgcgcgctccccgac
gtccgcgacggattaaaacccgttcaccgccgcatattgtacgcgatggacgaactcggt
cttcgaagcagcggtgcgacgagaaagtgcgcaaaaatcgtcggagacgtgctcggtaaa
ttccacccgcacggagatgcttccgtctacgacgcgatcgttcacttgggtcaggatttt
tatctgcgctatccggtgatcacgccgcagggaaacttcggtacgattgccggagatcct
gccgccgcataccgctataccgaagcgaagatggcaaagcttgccgaagagatggtcgcg
gacatagacaaagatacggtcgattttgttccgaacttcgacgaaacggcaaaagagccg
accgtgctcccgtcgaaactgccgtatctgctcgtaaacggtgcgtccggcatcgcagtc
ggtatggcgacgaatatgccgccacacaatctccgtgaaatcgcgtcggccgtatcggcc
tatatcgacaatcccgacataacgatagaagaattgagcaaaatcgtgcgcggccccgat
tttccgaccggcggcattattttcgggagaggcggcatcaaacaggcgtacaaaacgggt
cgcggcaaaataatcgtgcgcggccggttcaatatcgaaacggcaaaaggcggccgagag
tcgattatctttacggaagtgccttacggtgtaaatacgaaagtgctgtgtgaacgcatc
ggcgaactcgcacgcaacaaagacatcgacggtataaccggcataaacgacgaaagctcc
gaccgcaccggtatgaggatcgtcatcgatttgaagcgcggcgcgattacgaaaatcgta
ttgaatcagctgtttacgaagacagcgcttcaatcgaatttcggcgtcatcaatctcgcg
ctcgtcggcgggcggccgcagattctcacgctcaaacagcttgtacagcactttgtcgaa
caccgcgatcaggtcgtcacgcgccgcacgcagttcgaactcaacaaagcgctcgcgcgt
gagcatattttgcaggcgctcatcgtcgcgatcaacaatatcgacgaagtgatcaaaata
atccgcgcgagccgcgacaccgaagaagcgaaaaacaatctcaaaaagcgtttcgatttc
gatgacgtgcaggcgcaggcgatcgtcgatatgcagttgaaacgcctcacacatctcgaa
atcgacgatttgaaaaaagagcttgcggaacttgaagcgcttatcgcacacttacgcgat
ctccttgcgcatcacgaaaagctgctcgcgcttgtcaaaaccgaaacgaacgaacttgcc
gaaaaatacggcgacgaccgccgcaccgatatcgttgcggatgaaatcgaagagatcaac
gtcgaagacatgatcaaacaggaagacgtcgttatcctcgtttcaaagctcggctatatc
aagcgacttgccgcgacgcagtataaaagtcaggggagaggcggcaagggcagcttcagc
gcaaacctcgtcgaagacgattacatcaaccagatttttatcgcatcgacgcacgactgt
atcatgtttatcacgaacgaaggaaaagcgtattggataaaagtccacgaaattcccgaa
gcgtcgaagatgagccgcggttcgcatatcaaaagcctgctcgccgtttccgccgatgaa
gagattacgacgacggtgacggtaaaagaattcagcggagataattacgtgctcatggcg
acgacgaacggcgtcgtcaaaaaaacagcgctcagcgattttgcaaacgcaaagacaaag
ggcgtcatcgcgatcagactcgacggcggcgacaagctcgtcagcgcgattttgaccgcc
ggcaaaaacgacgtatttttcgtttcacgcagaggaaaagcgctccgcatatcggaagac
gacgtgcggccgatgggacgggcgagccgcggaacgcgcggtatgaaacttgccgaagga
gacgagatcgcggcggccgtgcgggcggaagcgggtaaaagcatcatgctcgtcaccgaa
aaaggcttcggcaagcgcatcaatcccgaagacttcaaatcgcacggacgcggtaccggc
ggccagcggtgctacggcaataccgaagagcgcggcgaaataatcggcgcccttgccgtt
gccgacggagatgaagtgctgtgcatcacgagccaaggaaaaacgcttcgggttgcggcg
ggcgatatcaaagagcagggcgcatcttcaaccggagtgtccgtcgtcaaagtcgatgca
cccgattatctggtcggcatcgaccgcgtagccgatgaagaagcggataaagacgataca
aaaaacacgtag
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