Treponema socranskii subsp. buccale: HRI97_12570
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Entry
HRI97_12570 CDS
T08383
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tsk
Treponema socranskii subsp. buccale
Brite
KEGG Orthology (KO) [BR:
tsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsk03032
]
HRI97_12570 (gyrB)
03400 DNA repair and recombination proteins [BR:
tsk03400
]
HRI97_12570 (gyrB)
Enzymes [BR:
tsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HRI97_12570 (gyrB)
DNA replication proteins [BR:
tsk03032
]
Prokaryotic type
DNA Topoisomerases
HRI97_12570 (gyrB)
DNA repair and recombination proteins [BR:
tsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HRI97_12570 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UTD03826
LinkDB
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Position
complement(2801768..2803687)
Genome browser
AA seq
639 aa
AA seq
DB search
MSQSPEHYSAGSIQVLKGLEAVRKRPGMYIGSTGPQGLHHLVYEVVDNSIDEAMAGFCDR
IIVALEKDDIVRVEDNGRGIPVGMHPTEHVSALELVLTRLHAGGKFDKGAYKVSGGLHGV
GVSCVNALSSWMEATIDSDGKRWFQRYEIGVPKTKVQEIGTTDRHGTQIRWKADKTIFTE
TTTYDFDVLAKRLRELAFLNSGITIVFRDERLETPKEVVFKFDGGIRHFVSYLNEGKNVI
PAEPAFIEGEDNGVMTELALQYNDGYNETIYTYVNDINTVEGGTHLDGFKIALTFVLNKF
LEANQKLSKKMDEKLTGEDVRAGITAVLSLKVPEPQFEGQTKTKLGNSEVRTIVDSLVKE
KLTLFFEQHPQDLEKILEKAVGEASARIAARRAKEATRRKSGLDSFGLPGKLSDCSSKDP
AECEVYIVEGDSAGGSAKKGRDSKRQAILPLWGKMLNVEKTRIDKVINNDKLEPVIASLG
AGIGKDFDISKLRYHKIIIMADADVDGSHIRTLLLTFFFRYMPQIIEDGYVYLAMPPLYK
VSWNKKEWYVYDDNEKAEVLKQLGDNAAKASVQRYKGLGEMDGTQLWETTMDPARRKMKR
VTIPDVVAADKMFSVCMGEAVEPRRKFIEENAVYANLDV
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatcaccggaacattattcagcgggcagcattcaagttttaaaaggtctcgaa
gcggtgcgcaaacggccgggtatgtacatcggttcgaccgggccgcaggggcttcatcat
ctcgtatatgaagtcgtagacaacagtatcgacgaagcgatggcgggtttttgcgatcgg
atcatcgttgccctcgaaaaagacgatatcgtacgcgtcgaagacaacggccgcggcatc
cccgtcggcatgcatccgacggagcacgtgagcgcgctggaactcgttttaacgcgtctg
cacgccggcggcaaattcgataaaggcgcgtacaaagtttccggcggtttgcacggcgtc
ggcgtcagctgcgtcaatgcgctttcctcatggatggaagcgacgatcgattccgacggt
aaacgctggtttcagcggtacgaaatcggtgtacccaagacgaaagtgcaggaaatcggt
acaaccgaccgccacggtactcaaatacgctggaaagccgacaaaacgatttttaccgaa
acgacgacttacgattttgacgttcttgcaaaacgcttgcgcgaactcgcgtttttgaac
agcggcattacgatcgtattccgcgacgagcggctcgaaacgccgaaagaggtcgtcttt
aaattcgacggcggcatccgccacttcgtatcctatctcaacgaagggaaaaatgtcatt
ccggcggaaccggcttttatcgaaggcgaagacaacggcgttatgaccgaactcgcgctc
caatacaacgacggctataacgaaacgatttacacttatgtcaacgatatcaatacggtc
gaaggcggaactcacctcgacggctttaaaatcgcgctgactttcgtactcaataaattt
ttggaagcgaatcaaaaactttccaaaaaaatggacgaaaagctcaccggcgaagacgtc
cgtgccggcattaccgccgttttatcgctcaaagtgcccgaaccgcagtttgaagggcag
acgaaaacgaagctcggtaacagtgaagtgcgcacgatcgttgattcccttgtcaaagaa
aaattgacgctctttttcgaacagcatccgcaggatttggaaaagatcctcgaaaaagcg
gtcggagaagcgagcgcgcggatcgcagctcggcgggcaaaagaagcgacgaggcgtaaa
agcggtctcgacagtttcggtcttccgggcaaactttccgattgttcgtcgaaagatccc
gccgaatgcgaagtgtacatcgttgagggcgattccgcaggcggttcggccaaaaaaggc
cgcgattcgaagcggcaggccatccttccgctgtggggcaaaatgctcaacgtcgaaaag
acgcggatcgacaaagtgatcaacaacgacaaacttgaaccggttatcgcgtctttgggc
gccgggatcggaaaagatttcgacatatcgaagctccgctatcacaagataatcatcatg
gccgatgccgatgtcgacggttcgcacatccgcacgctgctgttgacgttctttttccgc
tatatgccgcagatcatcgaagacggttatgtgtaccttgcgatgccgccgctgtacaaa
gtgagctggaataaaaaagagtggtacgtatacgacgacaacgaaaaagccgaagttttg
aagcagctcggcgacaatgcggcaaaggcttccgttcagcgctacaaaggtctcggcgaa
atggacggtacgcagctgtgggaaacgacgatggatcccgcgagacgaaaaatgaagcgc
gtgacgattcccgatgtcgtcgccgccgacaaaatgttcagcgtgtgcatgggagaagcg
gtcgaaccgcgccgtaagtttatcgaagaaaacgccgtttatgccaatttggacgtttga
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