Thermococcus siculi: A3L11_09675
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Entry
A3L11_09675 CDS
T05103
Name
(GenBank) DNA helicase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tsl
Thermococcus siculi
Brite
KEGG Orthology (KO) [BR:
tsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsl03400
]
A3L11_09675
DNA repair and recombination proteins [BR:
tsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
A3L11_09675
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Motif
Pfam:
DUF87
HAS-barrel
HerA_C
TrwB_AAD_bind
FtsK_SpoIIIE
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
ASJ09484
UniProt:
A0A2Z2MRU6
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Position
1813514..1815196
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AA seq
560 aa
AA seq
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MEARDKPVGIVFGESTTDHFTFIVNPKNELPRFGEFLIARNRDGDEVLALLKSIRNINWL
MDAGRGSYDYVEKTVNVFSKGVLDKSEAILATAKVLGVLRRSDGEFLAKPAPNRVPIKPG
EKVYLARDEDLERIFSQGHVKLGRLIARDNVEVNLDANKLVSRHFAVLAVTGAGKSNTIA
VLTKELVSNVNATVVILDPHGEYQRLSWPGARVNPIKATIDPGRIRLSEFATLLGIAENA
SLQRRFLGLVYRTVREEMRRKGKVVGGMDFIHEMEEKIEEWIRIYENSESKEERVIYYYD
DKGIKVPRKIQQRDLEALIRLKDYLGELRANFGEFISPVNVLSEIRPGMVNVIDLSGMEE
EQMITLASFVLRGILKNRIDYVKGVRTNDRNLVREVSERYPALTKPVLVIVEEAHIFAPR
GEKNQATLWLGKIAREGRKFGVGLGIVSQRPKKLDDDILSQTNTKIILKLVEPNDQRYVQ
QASEQISEDLLGDIASLGVGEAVIVGYAITIPAMVKIYSFEKDMNGHYGGGDIDIVGEWL
EGREDEEEVTEEEAIAELPL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccgcgataagcccgttggaatcgtgttcggtgaatcgaccactgaccacttc
acctttatagtgaacccgaagaacgagcttccgcgctttggggagttcctgatagcgaga
aacagggacggcgacgaggttctggctcttctaaagtcgataaggaacataaactggctg
atggatgcagggagggggagctacgactatgttgagaagacggtgaacgttttctcaaag
ggtgtccttgacaagagcgaggccatactcgcgacggcgaaggtcctcggggttctgagg
aggagtgatggagagttcttagcgaagcccgctcccaaccgcgttccgataaagccgggg
gagaaggtctaccttgctagggacgaggatctggagaggatcttctcccagggtcatgta
aagctcggcaggctcatagcgagggataacgtggaggtaaacctcgacgctaacaaactg
gtttcgaggcactttgcggttttagctgttaccggcgccggaaagtccaacaccatagcg
gttctcacgaaggagcttgtgagcaacgtcaacgccaccgtagtcatcctcgacccccac
ggtgaataccagaggctcagctggcccggagcaagggtgaacccgataaaggccacgata
gacccgggcaggataaggctcagcgagttcgccacccttcttgggatagctgagaacgcc
agcctgcagaggcgcttcctcggcctcgtctacagaaccgttcgggaggagatgaggagg
aaggggaaggtcgtcggcgggatggacttcatccacgagatggaggaaaagatagaggag
tggatacggatttacgagaactcggagagcaaagaagagagggtcatctactactatgac
gacaaagggataaaggtgcccagaaagatacagcagagggacctggaggcgctgataagg
cttaaggactacctgggcgagcttcgtgccaacttcggcgagttcataagccccgtcaac
gtcctcagcgagataaggcccggaatggtgaacgtcatagacctgagcggcatggaagag
gagcagatgattaccctggcgagcttcgttctcaggggaattctcaagaacaggatagac
tacgtgaagggagtgagaaccaacgacaggaacctcgtgcgtgaggtttcggagagatat
ccggctttaaccaagcccgtcctggtaatagtcgaggaggcccacatctttgccccaagg
ggcgagaaaaatcaggcgacgctctggctcggcaagatagctcgcgaggggagaaagttc
ggcgtcggtctcggcatcgtctcccagaggccgaagaaactcgacgacgacatacttagc
cagacgaacaccaagataatcctaaagctcgtcgaacccaacgaccagcgctacgtccag
caggcgagcgagcagataagcgaggacttgctgggcgacatagcctcactcggagtgggt
gaagcggtcatagtcggctacgcgataacgattccggcgatggtgaagatatacagcttc
gagaaggacatgaacggccactacggcggcggggacatcgacatcgtaggagaatggctc
gaagggagagaggacgaggaagaggtaaccgaggaggaggccatagcggagctcccgctg
tga
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