Thermococcus siculi: A3L11_10480
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Entry
A3L11_10480 CDS
T05103
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tsl
Thermococcus siculi
Pathway
tsl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A3L11_10480 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsl03021
]
A3L11_10480 (tfb)
Transcription machinery [BR:
tsl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
A3L11_10480 (tfb)
Prokaryotic type
Archaeal type
TFB
A3L11_10480 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
Sigma70_r4
Zn_Ribbon_Prim
HTH_Tnp_ISL3
HTH_AsnC-type
RB_B
RUBY_RBDX
Zn_ribbon_IS1595
ADK_lid
Zn_ribbon_tTFIIB
FtrD-like
ORC6
Ribosomal_S27e
Lar_restr_allev
Auto_anti-p27
FYDLN_acid
Motif
Other DBs
NCBI-ProteinID:
ASJ09634
UniProt:
A0A2Z2MS93
LinkDB
All DBs
Position
complement(1968430..1969329)
Genome browser
AA seq
299 aa
AA seq
DB search
MSNRRVCPVCGSTEFIYDPGRGEVICKVCGYVIEENVIDMGPEWRAFDASQREKRARVGA
PESILLHDKGLSTDIGIDRNLSGLMREKMYRLRKWQSRLRVSDAAERNLAFALSELDRIA
SQLSLPRHVEEEAARLYREAVRKGLIRGRSIESVIAACVYAACRLLKVPRTLDEIADISR
VDKKEIGRSFRFIARNLNLTPKKLFVKPTDYVNKFADELGLSERVRRRAIAILDEAYDKG
LTSGKSPAGLVAAALYIAGLLEDEKRTQREVAEVARVTEVTVRNRYKELVDKLNLKIPV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaatcgtagggtttgcccggtgtgtggctcgaccgagttcatctacgatccgggt
aggggagaggttatctgtaaggtttgcggttacgtcatcgaggagaacgtcatcgatatg
ggtccggagtggagggccttcgacgcgagccagagggagaagagggcgcgcgttggcgcc
ccggagagcattctccttcacgataagggtctctcaaccgatatcggaatcgacaggaat
ctttctggtctaatgcgtgagaagatgtaccgcctgaggaagtggcagtcccgtttgagg
gtcagcgatgccgctgaaagaaacctcgccttcgccctcagcgagctggacaggatcgcc
tcccagctcagcctccccaggcacgttgaggaggaggcagcaaggctctaccgcgaggcc
gttagaaagggtctcataaggggccgctccatagagagcgtcatagcggcctgcgtctac
gccgcctgcaggctcctcaaggttccgaggacgctggacgagatagccgacatatcgcgc
gtcgacaagaaggagatagggcggagcttccgcttcatagcaaggaaccttaacctcact
ccaaagaagctcttcgtcaagccgactgactacgtcaacaagttcgcggacgagctgggt
ctgagcgagagggtccggaggagggccatagccatactcgacgaggcctacgacaagggc
ctcacgagcggaaagagtccggccggtttggttgccgccgcactctacatagcgggcctc
ctggaggacgagaagagaacccagagggaagtggccgaggtcgcgcgcgttacggaggtc
accgtcaggaaccgctacaaggagcttgtcgacaagctcaacctcaagatacccgtctga
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