Tsukamurella tyrosinosolvens: ASU32_04815
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Entry
ASU32_04815 CDS
T05267
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsm
Tsukamurella tyrosinosolvens
Pathway
tsm03420
Nucleotide excision repair
tsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASU32_04815
03430 Mismatch repair
ASU32_04815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsm03400
]
ASU32_04815
Enzymes [BR:
tsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASU32_04815
DNA repair and recombination proteins [BR:
tsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASU32_04815
MMR (mismatch excision repair)
Other MMR factors
ASU32_04815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AUN39420
LinkDB
All DBs
Position
978301..980664
Genome browser
AA seq
787 aa
AA seq
DB search
MERKERGQELLEGLNPQQRAAVLHEGSPLLIVAGAGSGKTAVLTRRIAYLLAARNMHPGQ
ILAITFTNKAAAEMRERVAGIIGNRAKIMWVSTFHSTCVRILRAQAGLLPGMNSNFSIYD
ADDSRRLLTMIVKDMGLDAKKFAPRALATHISNLKNELIDPEQASADAAKTGEPFAVTVA
EVYGTYQSRLRGANAFDFDDLIGETVALLQSHPNVAQYYRRRFRHVMVDEYQDTNHAQYV
LVRELVGLETDADGVEPSELCVVGDADQSIYAFRGATIRNIEEFERDFPNAETILLEQNY
RSTQTILSAANAVISRNAGRREKKLWTDQGDGDLITGYVADNEHDEASFVVSEIDALADK
GVKYSDVAVFYRTNTAARVLEEVFIRHGVPYKVVGGVRFYERKEVRDLVAYLRAIDNPND
TVSLQRIVNTPRRGIGDRAQACLTVHAENRGGTFSTAIEDAVDGTVAMLNPRSRNAIATF
AGLMADLRRTAADEDQDLGDLLEAVVEKTGYRAELEGSSDPQDGARLENIEELISVAREF
SAQDFTDVVVDEGAPEPGSLAAFLERVSLVADADQVPDSDAGVVTMMTLHTAKGLEFPVV
FVTGWEDGQFPHMRALGDEAELAEERRLAYVGITRARERLYLSRAMIRATWGDPMQNPES
RFLAEIPQHLIDWRRLEPKRSQFGGSRGVFGQDRPSWGGQNGGGQYGGRGRSSGSDGGWT
PKRAPKPTRRANKLSLAVGDRVSHDSFGLGTVTAVTGAGPMERATFDFGSSGTVTLMTFG
GLPMEKL
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
gtggagcggaaggaacgcggccaggaactgctggaggggctgaacccgcagcagcgtgcg
gcggtgctgcacgagggctcgccgctcctcatcgtcgcgggcgcgggctcgggcaagacg
gccgtgctcacgcgccgcatcgcctacctgttggccgcccgcaacatgcacccgggccag
atcctcgcgatcaccttcaccaacaaggcggccgcggagatgcgggagcgcgtcgccggc
atcatcggcaaccgcgccaagatcatgtgggtctccacgttccactccacgtgcgtgcgc
atcctccgcgcgcaggccggcctgctgccgggcatgaactcgaacttctccatctacgac
gcggacgattcccgccgcctgctcaccatgatcgtcaaggacatgggactggacgcgaag
aagttcgcgccgcgggcgctcgccacccacatcagcaacctcaagaacgagctgatcgat
ccggagcaggcctccgcggacgcggcgaagacgggggagccgttcgcggtcaccgtcgcc
gaggtctacggcacctaccagtcccgcctgcgcggcgcgaacgccttcgacttcgacgat
ctcatcggggagacggtggcgctgctgcagtcgcaccccaacgtcgcgcagtactaccgc
cgccgcttccgccacgtgatggtcgacgagtaccaggacaccaaccacgcccagtacgtg
ctggtccgcgagctggtgggcctcgagaccgatgcggacggcgtcgagcccagcgagctg
tgcgtggtgggtgacgcggaccagtcgatctacgccttccgcggcgcgacgatccgcaac
atcgaggagttcgagcgggacttcccgaacgcggagaccatcctgctggagcagaactac
cgctccacccagaccatcctctccgcggccaacgcggtcatctcccgcaacgccggccgc
cgcgagaagaagctgtggaccgaccagggcgacggtgacctcatcaccggctacgtcgcc
gacaacgagcacgacgaggcgagcttcgtggtctcggagatcgacgcgctggccgacaag
ggcgtcaagtacagcgacgtggcggtcttctaccgcaccaacaccgccgcgcgcgtgctg
gaggaggtcttcatccgccacggcgtgccctacaaggtggtcggcggcgtccgcttctac
gagcgcaaggaggtgcgcgacctcgtcgcgtacctgcgcgccatcgacaacccgaacgac
accgtcagcctgcagcgcatcgtcaacaccccgcgccgcggcatcggcgaccgcgcgcag
gcctgcctcacggtgcacgccgagaaccgcgggggaacgttcagcaccgcgatcgaggac
gcggtcgacggcaccgtcgccatgctgaacccgcgctcgcgcaacgcgatcgccacgttc
gcgggcctcatggccgacttgcgtcgcaccgctgccgacgaggatcaggacctcggcgac
ctgctcgaggccgtcgtcgagaagacgggctaccgggccgagctggagggctcgtcggac
ccgcaggacggcgcgcgcctggagaacatcgaggagctcatcagcgtcgcgcgggagttc
tccgcccaggacttcaccgacgtcgtcgtcgacgagggcgcgcccgagcccggctcgctg
gcggccttcctggagcgcgtctcgctggtcgcggacgccgaccaggtccccgacagcgac
gcgggcgtcgtgaccatgatgaccctgcacaccgcgaagggcctcgagttccccgtggtc
ttcgtgaccggctgggaggacgggcagttcccgcacatgcgcgcgctcggcgacgaggcg
gaactcgccgaggagcggcgcctcgcctacgtcggcatcacccgcgcccgcgagcgcctc
tacctctcccgcgcgatgatccgcgccacctggggcgatccgatgcagaacccggagtcg
cggttcctcgccgagatcccgcagcacctcatcgactggcgccgcctcgaaccgaagcgc
agccagttcggcggctcccgcggcgtcttcgggcaggaccgcccgtcctggggcggccag
aacgggggcggccagtacggcggccggggccggtcctcggggtccgacggtggctggacg
cccaagcgggctcccaagcccacgcgccgcgccaacaagctctcgctcgcggtgggcgac
cgggtctcgcacgactcgttcggactcggcacggtcaccgcggtcacgggtgcggggccg
atggagcgcgcgacgttcgacttcggctcgtcgggcaccgtcaccctgatgaccttcggc
ggcctgccgatggagaagctgtag
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integrated database retrieval system
