Tsukamurella tyrosinosolvens: ASU32_06010
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Entry
ASU32_06010 CDS
T05267
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tsm
Tsukamurella tyrosinosolvens
Pathway
tsm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASU32_06010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsm03000
]
ASU32_06010
03400 DNA repair and recombination proteins [BR:
tsm03400
]
ASU32_06010
Enzymes [BR:
tsm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ASU32_06010
Transcription factors [BR:
tsm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ASU32_06010
DNA repair and recombination proteins [BR:
tsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ASU32_06010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AUN39618
LinkDB
All DBs
Position
complement(1203455..1204927)
Genome browser
AA seq
490 aa
AA seq
DB search
MTTSSPHLDFDRCYRAIAGRDPRFDGQFYTAVATTGIYCRPSCPATTPKAQNVSFHLTAA
AAQAAGYRACRRCLPDAVPGSPRWNLESDLAARAMRLIADGVVDRTGVTGLAERLGYSSR
QLTRVLTAELGAGPLALARAHRATTARILITGTSLPFSDIAFAAGFTSIRQFNDTIREVF
ARTPSELRAQRGPEPTAPSTGELSLRLALRGPYATGWVRWFLTAHAVAGLEHADGDRYAR
VLSLPGGNGIATVDLGSAGDGYVRATLSLAAMSDLSTAVTRLRHLLDLDADPAAVDEALA
ADPQLAPLVAATPGIRLFGCVDPAELLLRTMIGQQISIAAAATHQARLVAALGAEIDDPS
GRLTRAFPTPAAVAERGGEVLTGPRTRIAAILGAAADLAEGRLVLHAGMTREEARAELLR
LKGVGPWTADYVAMRLLADPDTLLASDLVVAKGAENLGLDIAADRWSPWGSYVSLHLWNH
SLTTDRRIAP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccagctcaccccacctcgacttcgaccggtgctaccgcgcgatcgccgggcgc
gatccccggttcgacggccagttctacacggccgtcgccaccaccgggatctactgccgc
ccgtcgtgcccggcgaccacgcccaaggcgcagaacgtgagcttccacctcacggccgcc
gcggcgcaggccgccgggtaccgggcgtgccggcgctgcctgcccgacgccgtgcccggc
tcgccccggtggaacctcgagtccgacctcgccgcgcgcgccatgcgcctcatcgccgac
ggggtggtcgaccggaccggcgtgacgggcctcgccgagcgcctgggatacagctcgcgg
cagctgaccagggtcctcaccgcggagctcggagcggggccgctggccctcgcgcgggcg
caccgcgccaccaccgcgcggatcctcatcaccggcacgtcactgcccttctccgacatc
gccttcgccgcgggcttcacctcgatccgccagttcaacgacacgatccgcgaggtcttc
gcgcggaccccgtcggagctgcgggcgcagcgcggccccgaaccgacggcgccgtcgacc
ggggagctgagcctgcgcctcgcgctccgcggaccgtacgccaccggctgggtgcggtgg
ttcctcaccgcgcacgccgtcgccggcctcgagcacgccgacggtgaccgctacgcccgc
gtcctgagcctgccgggcgggaacgggatcgccaccgtcgacctgggatccgcgggagac
gggtacgtccgtgccaccctctcgctcgccgcgatgagcgacctatcgaccgcggtgacc
cggctgcggcacctgctggacctggacgccgatccggccgcggtggacgaggcgctcgcc
gccgatccccagctcgccccgctggtggcggcgacacccggcatccggttgttcggctgc
gtcgaccccgcggagctgctgctgcgcaccatgatcgggcagcagatatccatcgccgcc
gcagccacccaccaggcgcggctcgtcgcggcgctcggcgcggagatcgacgacccgtcg
ggccggctcacgcgggccttccccaccccggccgcggtcgcggaacgcgggggcgaggtc
ctcaccggcccgcggacccggatcgccgcgatcctcggggccgcggccgacctcgccgag
ggccggctcgtgctgcacgcgggcatgacccgggaggaggcccgcgcggaactgctccgg
ctcaagggggtcgggccgtggaccgccgactacgtggcgatgcgcctgctcgccgacccc
gataccctgctcgcctccgacctcgtcgtcgcgaagggcgcggagaacctcgggctcgac
atcgcggccgaccgctggagcccgtggggcagctacgtctccctgcacctgtggaaccac
tccctcaccaccgaccggaggatcgccccgtga
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