Tsukamurella tyrosinosolvens: ASU32_10085
Help
Entry
ASU32_10085 CDS
T05267
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
tsm
Tsukamurella tyrosinosolvens
Pathway
tsm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tsm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ASU32_10085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsm03021
]
ASU32_10085
Transcription machinery [BR:
tsm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ASU32_10085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AUN40306
LinkDB
All DBs
Position
complement(2082752..2084206)
Genome browser
AA seq
484 aa
AA seq
DB search
MAATQTSSSAPSTGGVDGSATSAETPAKKTTAKKAPAKKAPAKKAPAKKAAAKKAAPAKK
APAKKAAAGPAKRTAKKAAGKKDASAAGAESGAEDEVDPELDGDPDPTELSDEDVALDAD
DTADDSTETKGKSAVTKPAPADAEDEEPSEQDKASGDFVWDEEESEALRQARKDAELTAS
ADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLFAEQQINRWLERGEKPAIGIRRDMNWI
ARDGNRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFS
TYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMD
ITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVL
DTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLR
DYLD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgacgcagaccagctccagcgcaccgtcgacaggcggcgtggacggttcggcc
acctcggcggagacccccgccaagaagaccaccgccaagaaggctcccgcgaagaaggct
ccggccaagaaggcacccgccaagaaggcggcggcgaagaaggccgctcccgcgaagaag
gcgccggcgaagaaggcggccgccggcccggcgaagcgcaccgcgaagaaggccgcgggc
aagaaggacgcctccgcagccggtgccgagagcggcgccgaggacgaggtcgatcccgag
ctcgacggcgatcccgatcccaccgagctctcggacgaggacgtcgcgctcgacgccgac
gacaccgccgacgactccacggagaccaagggcaagagcgcggtcacgaagcccgctccg
gcggacgcggaggacgaggagccgtccgagcaggacaaggcctccggcgacttcgtctgg
gacgaggaggagtccgaggcgctccgccaggcgcgcaaggacgccgagctgaccgcctcc
gcggactcggtgcgcgcctacctcaagcagatcggcaaggtggcgctcctcaacgccgag
gaggaggtcgagctcgccaagcggatcgaggccggcctgttcgccgagcagcagatcaac
cggtggctcgagcgcggcgagaagcccgcgatcggcatccggcgcgacatgaactggatc
gcccgcgacggcaaccgtgcgaagaaccacttgctcgaggccaacctgcgcctcgtggtc
tcgctggccaagcgctacaccggccgcggcatggcgttcctggacctgatccaggagggc
aacctcggcctgatccgcgccgtcgagaagttcgactacaccaagggctacaagttctcc
acgtacgccacctggtggatccggcaggcgatcacccgcgccatggccgaccaggcccgc
accatccgcatcccggtgcacatggtggaggtcatcaacaagctcggccgcatccagcgc
gagctgctccaggacctgggccgagagcccacgccggaggagctggcgaaggagatggac
atcacgcccgagaaggtgctggagatccagcagtacgcgcgtgagccgatctcgctcgac
cagaccatcggcgacgagggcgacagccagctcggcgacttcatcgaggactccgaggcc
gtcgtcgcggtcgacgcggtgtccttcacgctgctgcaggaccagctccagtcggtcctc
gacacgctgtccgagcgcgaggccggtgtcgtccgcctgcggttcggcctcaccgacggc
cagccgcgcaccctggacgagatcggccaggtctacggcgtgacgcgcgagcgcatccgg
cagatcgagtcgaagacgatgagcaagctgcgacacccgtcgcgctcgcaggtcctgcgc
gactacctggactag
DBGET
integrated database retrieval system