Tsukamurella tyrosinosolvens: ASU32_10145
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Entry
ASU32_10145 CDS
T05267
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tsm
Tsukamurella tyrosinosolvens
Brite
KEGG Orthology (KO) [BR:
tsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsm03016
]
ASU32_10145
Enzymes [BR:
tsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ASU32_10145
Transfer RNA biogenesis [BR:
tsm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ASU32_10145
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AUN40316
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All DBs
Position
complement(2093995..2095215)
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AA seq
406 aa
AA seq
DB search
MGKASSEPVPGIPLTEPAEGVPEPLTTVEEFADCAAALLRGTGPIAVDTERASGFTYSSR
AYLIQIKRTGSGLFLLDPIHEPEGLAPVIEAMRGVEWVLHAADQDLPCLRDDGFECDELF
DTELAGRLLGAPRVNLAAMTSEYTGYALAKGHGAADWSTRPLPHDWLNYAALDVEVLVDL
RDEAYERLSDAGKLEWALEEFEYERTRPDPLPKPDPWRRVSGLSTLRNRRQLARARELWL
ARDEMAEQRNVAPGRTLPDAAIVNAAAKNPTTEAELTALPVFGGPRMRRSAKRWLGAIHR
ANALPDAALPPLHGPRNGVPANNRWAKSNPEAAERLAAVRAALAAISDEVAVPVENLLPT
DAVRQLCWDGTADGAGAVDGALAASGARNWQRALTVTAVAAALASA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaaggcctcatcggaaccggtccccggcattccgctcaccgaacccgccgagggc
gtcccggagcccctcaccaccgtcgaggagttcgcggactgcgccgcggccctgctgcgc
ggcaccggccccatcgccgtcgacaccgagcgcgcatcgggtttcacctactcctcccgc
gcctacctgatccagatcaagcgcaccggctccgggctgttcctgctcgatccgatccac
gagcccgagggcctcgcgccggtgatcgaggcgatgcggggcgtcgagtgggtgctgcac
gccgccgaccaggacctgccgtgcctgcgcgacgacggcttcgagtgcgacgagctcttc
gacaccgagttggcgggccgcctgttgggtgcgccgcgggtcaatctcgcggcgatgacc
tccgagtacaccggctacgcgctggcgaagggacacggtgccgccgattggagcacccgg
cccctcccccacgactggctcaactacgcggcgctcgacgtcgaggtgctggtcgatctg
cgcgacgaggcctacgaacggctctccgatgcggggaagctggagtgggcgctcgaggag
ttcgagtacgaacgcacgcggcccgacccgctcccgaaacccgatccgtggcgccgcgtc
tcggggctgagcacgctgcgcaaccgccgccagctggcccgcgcccgcgagctgtggctc
gcgcgcgacgagatggccgagcagcgcaacgtcgcgcccgggcgcaccctgccggacgcg
gcgatcgtcaacgccgccgcgaagaatcccacgacggaagcggagctcaccgcgctgccg
gtcttcggcggaccgcggatgcggcggtcggcgaagcgctggctcggggcgatccaccgg
gccaacgcgctcccggacgccgcgctgccgccgctgcacggtccgcgcaacggggtgccc
gcgaacaaccgctgggcgaagtcgaatcccgaggccgccgagcgcctcgccgcggtgcgc
gccgcgctcgccgcgatctccgacgaggtcgcggtgccggtggagaacctgctcccgacc
gacgcggttcgtcagttgtgctgggacggcacggccgacggtgccggcgccgtcgacggc
gccctcgccgcctcgggcgcacggaactggcagcgcgcgctgaccgtcacggccgtcgcg
gccgccctcgcgtccgcctga
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