Tsukamurella tyrosinosolvens: ASU32_11835
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Entry
ASU32_11835 CDS
T05267
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
tsm
Tsukamurella tyrosinosolvens
Brite
KEGG Orthology (KO) [BR:
tsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsm03019
]
ASU32_11835
Enzymes [BR:
tsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ASU32_11835
Messenger RNA biogenesis [BR:
tsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ASU32_11835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
MTR4-like_stalk
Helicase_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUN40612
LinkDB
All DBs
Position
2434786..2437536
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AA seq
916 aa
AA seq
DB search
MTSSEFDSFTAALEFTLDPFQVQGCRALEQGRGVLVCAPTGAGKTVVGEFAVHLALAGGT
KCFYTTPIKALSNQKHAELTARYGAQNVGLLTGDTAINSSAPVVVMTTEVLRNMLYANST
TLDGLSHVVMDEVHYLADRFRGAVWEEVILHLPQDVRLVSLSATVSNAEEFGAWITEVRG
STEVIVDEHRPVPLWQHMLVGRRLFDLFDTKALRSAQESGQKNLVLDADLVRYVKQRESL
DRSFEPGINSRTGRRTGGRGRPQATRRPIPRPDVIALLDAEGLLPAITFVFSRSGCEQAL
TQCLRSPVVLTDQAQAEEIGHIVDKHVAEFSPADLDLLGYEEWRAALLRGFAAHHAGMLP
AFRHAVEELFVKGLVRAVFATETLALGINMPARTVVLERLVKYNGESHVELTPGEYTQLT
GRAGRRGIDIEGHAVVLWQTGVRPQEVAGLAGARTFPLISSFSPGYNMSINLLDRLGRHG
AERLLEASFAQFQADRSVVGLAKRVERGEKELATLSAQITEAAGGADYLEYVRLREAVRA
RERSLRREHLADRRDGAATALAELRRGDVIAVTGGRRRGLALVVEPSGDRRDPKPVVVTE
SSWSGRVGAADFVGDIAVLGTLRVPKNADYRSGRGKRDLASTLRNSAISAPRQQAKAQRP
AASDTQLADLRARMRAHPAHTGQRAPELDRLAERYARLEREVTASAATVRATTSSLAVTF
ERIVALLGDRGYIETVDGESELTEAGHRLARVYSESDLLVCECIEDGVFDGLDPAGLAAV
VSALVFESRGERGGMLLTGEKVPGAVRSAVRDVADRWTDIVAAEAAHRLEPSREPDIGFV
APMHQWAAGGTLAAVLMAAGERGRPLPAGDFVRWCRQVIDLLDQIKQTSFETRPGLATVA
TAAIAAVRRGVVAESG
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctctgagttcgacagcttcaccgccgccctcgagttcaccctcgacccgttc
caggtccagggctgccgcgcgctcgagcagggacgcggcgttctcgtctgcgccccgacc
ggcgccggcaagaccgtcgtcggcgagttcgccgtgcacctggccctcgcgggcggcacc
aagtgcttctacaccacgccgatcaaggcgctctccaaccagaagcacgccgaactgacg
gcgcgctacggcgcgcagaacgtcggtctcctgacgggagacaccgcgatcaactcctcc
gcaccggtggtcgtgatgaccaccgaggtgctgcggaacatgctctacgcgaattcgacc
accctcgacggcctgagccacgtcgtgatggacgaggtgcactacctcgcggaccggttc
cgcggcgcggtgtgggaggaggtgatcctgcacctcccgcaggacgtgcgcctcgtcagc
ctgtcggcgacggtgtccaacgccgaggagttcggcgcctggatcacggaggtccgcggc
agcaccgaggtgatcgtcgacgagcaccgcccggtgccgctgtggcagcacatgctcgtc
ggccgcaggctgttcgacctcttcgacacgaaggcgctgcgctcggcgcaggagtcgggc
cagaagaacctcgtcctcgacgccgacctggtgcgctacgtcaagcagcgcgaatcgctg
gaccgcagcttcgaacccggcatcaacagccgcacggggcgccgcaccggcggccggggc
cgcccccaggcgacccgtcgcccgatcccgcggcccgacgtcatcgcgttgctcgacgcc
gagggcctgctgcccgcgatcacgttcgtcttctcacggtccggttgcgaacaggcgctg
acccagtgcctgcggtcgccggtggtgctcacggatcaggcgcaggccgaggagatcggc
cacatcgtcgacaagcacgtcgcggagttctcgcccgccgacctcgacctgctgggctac
gaggagtggcgggcggcgctgctccgcggcttcgccgcgcaccacgccggcatgctgccc
gcgttccggcacgccgtcgaggagctgttcgtcaagggcctggtgcgggccgtcttcgcc
acggagaccctcgcgctgggcatcaacatgcccgcgcgcaccgtcgtgctggaacgcctg
gtcaagtacaacggcgagtcgcacgtcgagctgaccccgggcgagtacacccaactcacc
ggccgagccggccgccgtggcatcgacatcgagggccacgccgtggtgctgtggcagacc
ggcgtgcgcccgcaggaggtcgccggtctcgccggcgcccgcacgttcccgctgatcagc
tcgttctcgcccggctacaacatgtcgatcaacctgctcgaccgtctcggccgccatggt
gccgagcgattgctcgaggccagcttcgcgcagttccaggcggaccggtccgtcgtcggg
ctggccaagcgcgtcgagcgcggcgagaaggagctcgcgacgctcagcgcccagatcacc
gaggccgccggcggcgccgactacctcgagtacgtacggctgcgcgaggcggtccgggcc
cgggagcggtccctgcgccgcgagcatctcgcggaccgccgcgacggtgccgccaccgcg
ctcgccgagctgcgccgcggcgacgtcatcgccgtgacgggcggccgccgccggggcttg
gcactggtggtggagccctcgggcgaccgccgcgatcccaagcccgtcgtggtcaccgag
agcagctggtcgggccgcgtcggcgccgccgacttcgtgggcgacatcgccgtgctcggg
acgctccgggtcccgaagaacgccgactaccgctccggccgcggcaagcgcgatctcgcg
tccacgctgcgcaacagcgccatctccgctccgcggcagcaggcgaaggcgcagcggccc
gccgcgtccgacacccagctcgccgacctccgggcccggatgcgggcccaccccgcgcac
accgggcagcgcgcccccgagctggaccggctcgccgaacgctacgcccggctggagcgc
gaggtcaccgcgtcggcggcgacggtccgcgccaccacgtcgtcgctggccgtcacgttc
gagcggatcgtggcgctgctcggcgaccgcgggtacatcgagacggtcgacggcgagtcc
gagctcaccgaggccgggcaccgtctggcccgcgtctacagcgaatccgacctgctcgtc
tgcgagtgcatcgaggacggcgtcttcgacggcctcgacccggccggcctcgcggcggtg
gtgagcgcgctggtcttcgagtcccgcggcgaacgcggcgggatgctcctgaccggcgag
aaggttcccggcgcagtgcgctcggccgtgcgggacgtcgcggaccggtggaccgacatc
gtcgccgcggaggccgcgcaccggctggagccgagccgcgagccggacatcggtttcgtc
gcgccgatgcaccagtgggccgccggcgggacgctcgccgccgtgctgatggcagcaggt
gagcggggccgcccgctcccggcgggcgacttcgtccgctggtgccgacaggtgatcgat
ctgctcgatcagatcaagcagacctcgttcgagacccgcccgggtctggcgaccgtcgcc
accgcggcgatcgccgccgtgcggcgcggcgtcgtcgcggaatcgggctga
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