Tsukamurella tyrosinosolvens: ASU32_12375
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Entry
ASU32_12375 CDS
T05267
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tsm
Tsukamurella tyrosinosolvens
Pathway
tsm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASU32_12375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsm03400
]
ASU32_12375
Enzymes [BR:
tsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ASU32_12375
DNA repair and recombination proteins [BR:
tsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ASU32_12375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AUN40706
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All DBs
Position
2538983..2539834
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AA seq
283 aa
AA seq
DB search
MRIGTFNVNGIRAARRRGFDGWLAGRGLDVLALQELRCPPAEVGGFPGYHAAIDCGSIPG
RNGVAILSREAPSAVRTWAGRPPRARGLAEYAHEGRYVEADFSGLTVACLYLPKGGLPAH
LQRPGNMRDTPDGGAKHARKMRFLDAFARELDRNRRAALAAGREFLLLGDLNLAHLPHDV
TNWRPAQKMEGFLPEEREWLGERLGPRRLVDVVRTLHGDRPGPLSWWSWAGESFTKDVGW
RIDHHLATPRLARTARSVVVDKEASPEERLSDHASVVVDYALG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatcggcacgttcaacgtcaacgggatccgggcggcgcggcggcgcggcttcgac
ggctggctcgcgggccgcgggctggacgtgctggcgctgcaggagctgcgctgcccgccc
gccgaggtgggtggattccccggctatcacgcggcgatcgactgcggttcgatcccgggg
cgcaacggggtcgcgatcctgtcccgggaggcaccgtcggccgtgcggacctgggcgggc
cggccgccccgcgcccgcggcctggcggagtacgcccacgagggcaggtacgtcgaggcg
gacttctccggcctgacggtggcctgcctgtacctgcccaagggcgggctgcccgcgcac
ctgcagcgccccgggaacatgcgggacacgcccgacggaggcgccaaacacgcccgcaag
atgcgcttcctcgacgccttcgcgcgcgagctggaccgcaaccggcgggccgcgctcgcc
gccgggcgcgagttcctgctgctcggcgacctgaacctggcgcacctgccgcacgacgtc
acgaactggcggccggcacagaagatggagggcttcctccccgaggagcgcgagtggctc
ggggagcgactcggcccgcggcgcctcgtcgacgtggtgcgcacgctgcacggcgaccgc
cccggcccgctgtcgtggtggagctgggcgggcgagtccttcaccaaggacgtgggctgg
cgcatcgaccaccacctcgcgacgccgcggctcgcgcgcaccgcgcggtccgtcgtggtc
gacaaggaggcctcgcccgaggagcgcctgtccgaccacgcatcggtcgtcgtggactac
gcgctcggctga
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