Tsukamurella tyrosinosolvens: ASU32_13225
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Entry
ASU32_13225 CDS
T05267
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
tsm
Tsukamurella tyrosinosolvens
Pathway
tsm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASU32_13225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsm03400
]
ASU32_13225
DNA repair and recombination proteins [BR:
tsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASU32_13225
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASU32_13225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
AAA_25
RsgA_GTPase
nSTAND1
AAA_22
AAA_23
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
ScfRs
cobW
Motif
Other DBs
NCBI-ProteinID:
AUN40846
LinkDB
All DBs
Position
complement(2717563..2720421)
Genome browser
AA seq
952 aa
AA seq
DB search
MVDRLIVRGAREHNLRGIDVDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTPH
CPECGSVIARQTPQQIVDQVLDMEQGTRFQVLAPVVRTRKGEFVDLFNQLQTQGYSRARI
DGVVYQLAEPPKLKKQEKHDIEVVIDRLAVKATAKQRLTDSIETALRLADGIVVLDFVDR
EENDPERERRFSEKMACPNGHPIAVDDLEPRSFSFNSPYGACPECDGLGVRKEVDPELVV
PDPLLSLADGAIAPWSSGQSAEYFLRLLSGLGDAMGFDLDTPWKDLPAKARKAVIEGSEH
QVHVKYRNRYGRTRSYYAEFEGVMPFLHRRLESTESEQMKERYEGYMRDVPCPACSGARL
RPEILAVTLDHPRFGEKSIADVASMSVGECSDYLSDLKLGAREAAIAGRVLKEVQARIAF
LLDVGLEYLSLSRAAGSLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNRRLID
TLVRLRDLGNTLIVVEHDEDTIRTADWVVDIGPHAGEHGGKVVHSGTYKALLKNKDSLTG
AYLSGRRALPVPAVRRPIDKKRQLKVVGAREHNLQNIDVAFPLGVLTAVTGVSGSGKSTL
VNDILATVLANKLNGARQVPGRHSRVTGLDGLDKLVQVDQSPIGRTPRSNPATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKNIAEVLDMPIEEAAEFFEAVTSIHRYLKTLVEVGLGYVRLGQPATTL
SGGEAQRVKLAAELQKRSNGRTVYILDEPTTGLHFEDIAKLLQVIDGLVDKGNSVLVIEH
NLDVIKTADWIVDMGPEGGSGGGTVVAQGTPEDVAAVPDSYTGTFLKEVLST
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgatcgtttgatcgtgcgcggagcgcgcgagcacaacctgcggggtatcgatgtg
gatctcccgcgcgacagcctgatcgtgttcacggggctctcgggctccggcaagtccagc
ctcgccttcgacacgatcttcgcggaggggcagcggcggtacgtcgagtcgttgtcggcg
tacgcgcgccagttcctcgggcagatggacaagcccgacgtcgacttcatcgagggcctc
tcgcccgcggtgtcgatcgaccagaagtcgaccaaccggaacccgcggtcgaccgtcggc
accatcaccgaggtgtacgactacctgcgcctgctgtacgcgcgggccggcacgccgcac
tgtcccgagtgcggttcggtgatcgcgcggcagacgccgcagcagatcgtcgaccaagtg
ctcgacatggagcagggcacgcggttccaggtgctcgcgcccgtcgtccgcacccgcaag
ggcgagttcgtcgacctgttcaaccagctgcagacgcagggctactcccgcgcccggatc
gacggcgtggtgtaccagctcgcggagccgccgaagctgaagaagcaggagaagcacgac
atcgaggtcgtgatcgaccgcctggccgtgaaggcgacggccaagcagcggctcaccgac
tcgatcgagacggccctgcggctggccgacggcatcgtcgtgctcgatttcgtggaccgg
gaggagaacgatcccgagcgcgagcggcgcttctccgagaagatggcctgccccaacggg
caccccatcgcggtcgacgatctcgagccccgctcgttctccttcaactcgccgtacggc
gcgtgcccggagtgcgacggcctcggcgtccgcaaggaggtcgacccggagctcgtcgtg
cccgacccgctgctctcgctcgccgacggtgccatcgccccctggtcgtcggggcagagc
gcggagtacttcctgcgcctgctctccggcctcggcgatgcgatgggcttcgacctggac
accccgtggaaggacctgccggcgaaggcccgcaaggccgtcatcgagggctccgagcat
caggtgcacgtgaagtaccgcaaccggtacggccgcacccgctcgtactatgccgagttc
gagggcgtgatgcccttcctgcaccgccgcctcgagtccaccgagtcggagcagatgaag
gagcggtacgagggctacatgcgcgacgtgccgtgtcctgcgtgttcgggcgcgcggttg
cggcccgagatcctcgccgtgacgctcgaccatccgcggttcggcgagaagtcgatcgcg
gacgtcgcgtcgatgtccgtgggggagtgctccgactacctctccgacctcaagctgggc
gcgcgcgaggcggcgatcgccgggcgcgtgctcaaggaggtgcaggcccgcatcgcgttc
ctgctggacgtgggcctggagtacctctccttgtcgcgcgccgcgggctcgctgtcgggc
ggcgaggcgcagcgcatccggctcgccacgcagatcggctccggcctcgcgggcgtgctc
tacgtgctcgacgagccgtcgatcggcctgcaccagcgcgacaaccgccggctcatcgac
accctcgtgcggctgcgcgacctgggaaacacgctcatcgtcgtcgagcacgacgaggac
acgatccgcaccgcggactgggtcgtcgacatcggtccgcacgcgggcgagcacggcggc
aaggtcgtgcacagcgggacgtacaaggcgctgctcaagaacaaggactcgctgaccggc
gcctacctgtcggggcggcgcgcgctgccggtgcccgcggtgcggcggccgatcgacaag
aagcggcagctcaaggtcgtcggcgcccgcgagcacaacctgcagaacatcgacgtggcc
ttcccgctgggcgtgctgacggcggtgacgggcgtgtcggggtcgggcaagtcgaccctg
gtcaacgacatcctcgcgacggtgctggcgaacaagctcaacggggcgcgccaggtcccg
gggcggcacagccgcgtgaccgggctcgacggcctcgacaagctcgtgcaggtcgaccag
tcaccgatcggccggacgccgcggtccaacccggcgacctacacgggcgtgttcgacaag
atccgcacgctgttcgccgccaccaccgaggcgaaggtccgcggctaccagcccggacgg
ttctcgttcaacgtcaagggcggccggtgcgaggcgtgctcgggtgacggcacgatcaag
atcgagatgaacttcctgccggacgtctacgtcccctgcgaggtgtgccacggcgcgcgg
tacaaccgcgagacgctggaagtgcactacaagggcaagaacatcgccgaggtgctcgac
atgccgatcgaggaggccgccgagttcttcgaggcggtcacgtcgatccaccgctacctc
aagaccctcgtcgaggtcggcctcggctacgtccggctgggccagcccgcgaccacgctg
tcgggcggcgaggcgcagcgcgtcaagctcgcggcggagctgcagaagcggtccaacggc
cgcaccgtctacatcctcgacgagcccacgacgggtctgcacttcgaggacatcgcgaag
ttgctgcaggtgatcgacgggctcgtcgacaagggcaactcggtgctcgtcatcgagcac
aacctcgacgtgatcaagaccgcggattggatagtcgacatgggccccgagggcggtagt
gggggcggcaccgtcgtcgcgcagggcacccccgaggacgtggccgcggtgccggattcc
tacacagggaccttcctcaaggaggttctgtcgacgtag
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