Tsukamurella tyrosinosolvens: ASU32_13285
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Entry
ASU32_13285 CDS
T05267
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
tsm
Tsukamurella tyrosinosolvens
Pathway
tsm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASU32_13285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsm03400
]
ASU32_13285
DNA repair and recombination proteins [BR:
tsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASU32_13285
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASU32_13285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_16
UB2H
AAA_19
AAA_5
AAA_30
UPF0730
DUF87
UvrD-helicase
Helicase_RecD
AIG1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AUN40858
LinkDB
All DBs
Position
complement(2733567..2735729)
Genome browser
AA seq
720 aa
AA seq
DB search
MAFAAEQPVVAHSEHRPIGEIERAPAEFTVVSEYEPAGDQPTAIADLERRLRSGERDVVL
LGATGTGKSATTAWLIEKVQRPTLIMAPNKTLAAQLANELRAMLPHNAVEYFVSYYDYYQ
PEAYIAQSDTYIEKDSSINDDVERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDR
SVQLEVGMEVDRDALLRLLVDVQYSRNDTAFTRGSFRVRGDTVEIIPSYEELAIRIEFFG
DEIEALYYLHPLTGDIVRQVQDLRIFPATHYVAGPERMARAIEGIEAELEERLAEFERQG
KLLEAQRLRMRTQYDVEMMRQVGFCSGIENYSRHIDGREAGSAPATLIDYFPEDFLLVID
ESHVTVPQIGAMFEGDASRKRNLVDFGFRLPSAVDNRPLTWEEFTGRIGQTVYLSATPGQ
YELGQTGGEFVEQVIRPTGLVDPQVVIKPTKGQIDDLIHEIRDRTERDERVLVTTLTKKM
AEDLTDYLLEAGIRVRYLHSDIDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSTTSLIQTIGRAARNVSGEVHMYADKVTESMRVAIEETERRREKQIAY
NTEMGVDPKPLRKKIADILDQVYTEADDTEQAIGGSGRNATRGRRAQGELRSASAVSAGM
YEGEDVKSMPRAELADLISELTDQMMNAARELQFELAGRIRDEIADLKKELRGMDAAGLQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgcggcagagcaaccggtggtggcgcactccgagcaccgccccatcggggag
atcgagcgggccccggcggagttcacggtggtcagcgagtacgagccggcgggcgaccag
cccacggccatcgccgacctcgagcgcaggttgcgctcgggcgagcgcgatgtggtgctg
ctgggcgccaccggcaccggcaagtcggccaccacggcctggctgatcgagaaggtgcag
cggcccacgctgatcatggcgccgaacaagacgctcgccgcgcagctcgccaacgaactc
cgggcgatgttgccgcacaacgcggtcgagtacttcgtctcctactacgactactaccag
cccgaggcgtacatcgcgcagtccgatacgtacatcgagaaggactcgtcgatcaacgac
gacgtggagcggctgcggcactccgccacctcgtcgctgctgtcgcggcgcgacgtcgtg
gtggtcgcgtccgtctcgtgcatctacggcctcggcacgccgcagagctacctcgaccgc
tcggtacagctcgaggtcggcatggaggtcgaccgggacgcgctgctgcgcctgctcgtc
gacgtgcagtactcgcgcaacgacacggcgttcacccgcggctcgttccgggtccgcggc
gacacggtggagatcatcccgtcctacgaggagctcgcgatccggatcgagttcttcggc
gacgagatcgaggccctgtactacttgcacccgctgacgggcgacatcgtgcggcaggtc
caggacctgcgcatcttcccggcgacgcactacgtcgcggggcccgagcggatggcccgc
gccatcgagggcatcgaggcggagctcgaggagcggctggcggagttcgagcggcaggga
aagctgctcgaggcccagcggctgcggatgcgcacgcagtacgacgtggagatgatgcgg
caggtggggttctgctccggcatcgagaactacagccgccacatcgacggccgcgaagcg
ggttccgcgccggccaccctcatcgactacttcccagaggacttcctcctggtgatcgac
gagtcgcacgtgaccgtcccgcagatcggcgcgatgttcgagggcgacgcctcccgcaag
cgcaacctcgtggacttcggcttccggctcccttccgccgtcgacaaccgtccgctcacc
tgggaggagttcaccggtcgcatcgggcagaccgtctacctctcggccacgcccggtcag
tacgagctggggcagaccggcggtgagttcgtggagcaggtcatccgccccaccggcctc
gtggacccgcaggtggtgatcaagccgaccaaggggcagatcgacgacctcatccacgag
atccgcgaccgtaccgagcgcgacgagcgcgtgctcgtcaccacgctcaccaagaagatg
gcggaggacctcacggactacctcctggaggcgggcatccgggtccgctacctgcacagc
gacatcgacaccctgcgccgggtggagctgctgcggcagctgcgcctcggcgagtacgac
gtgctggtcggtatcaacctgctccgcgagggcctcgacctgccggaggtctcgctggtg
gcgatcctcgacgccgacaaggagggcttcctccggtccacgacctcgctgatccagacg
atcggccgcgcggcgcgcaacgtctcgggcgaggtgcacatgtacgccgacaaggtgacc
gagtcgatgcgcgtcgcgatcgaggagaccgagcgccgtcgcgagaagcagatcgcctac
aacaccgagatgggcgtcgatccgaagccgctgcgcaagaagatcgccgacatcctcgac
caggtgtacacggaggcggacgacacggagcaggccatcggcggctccggccgcaacgcc
acccgcggccgtcgcgctcagggcgagctgcggtcggcgtccgcggtgagcgccgggatg
tacgagggcgaggacgtgaaatcgatgccgagggccgagctcgcggacctgatctccgaa
ctcaccgaccagatgatgaatgccgcgcgggaactgcaattcgagctcgcgggccggatc
cgggacgagatcgccgacctgaagaaggagctccgaggaatggacgccgccggtttgcaa
tga
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