Tsukamurella tyrosinosolvens: ASU32_17350
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Entry
ASU32_17350 CDS
T05267
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsm
Tsukamurella tyrosinosolvens
Pathway
tsm03420
Nucleotide excision repair
tsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASU32_17350
03430 Mismatch repair
ASU32_17350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsm03400
]
ASU32_17350
Enzymes [BR:
tsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASU32_17350
DNA repair and recombination proteins [BR:
tsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASU32_17350
MMR (mismatch excision repair)
Other MMR factors
ASU32_17350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUN41556
LinkDB
All DBs
Position
complement(3551504..3553624)
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AA seq
706 aa
AA seq
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MSDPAGILDGVIEALDPEQQEAVLAPRGPVCVLAGAGTGKTRTITHRIAHQVSTGHVAAG
QVLAVTFTSRAAGEMRARLRSLGIGGGDGQPGVQAVTFHAAAMRQLRYFWPRAIGDTRWE
LLDNKFPVIGRAARDCDLRPETDTIRDLLSEIDWAKASLVTPETYAKAVEDAGRTAPMAP
GTVADVYAAYERRKTDQDGNRLLDFDDLILVTAAILEDNHVVAEEFRDRYRSFVVDEYQD
VTPLQQQLLNAWLGDRDDLTVVGDANQTIYSFTGATPNYLLDFTRRFEDATIVRLQRDYR
STPQVVALANKVIGAAQGRVAGTRLELIGQRPDGPAPIYAEVDDEPAEAKLVAKRIRELL
AKGVPASEIAILYRINAQSAVHEAALTEAGIPYQVRGGSAFFERPEIGQAVRALMERAGQ
FGGVAGDELLSLVKGALEPLGLTPEAPDGARALERWQALGALVELTADLAKERPGLTLAE
LIGELRARAEAKHPPTMQGVTLSSLHAAKGLEWDAVFLVGLTEGSVPISQAIAKGDPEPI
EEERRLLYVGVTRAREHLHLSWALARNEGGRKTRKRTRFLDVVAGQADAGRPRADSGPSK
GKRRSSDICRVCGGILDTREEKLRSRCEDCPSDLNDELVEALKIWRTGQARDQQVPPYTI
FSNATLFAIAEHQPRTRAQLVRINGIGSTKVDKYGDEVLALVSEHA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ctgtcggacccggctggaatactcgacggtgtgatcgaagcactggacccggaacagcaa
gaggcggttctcgcgccgcgcggaccggtgtgcgtgctggcgggcgcgggcacgggcaag
acccgcaccatcacgcaccgcatcgcgcaccaggtgtccacggggcacgtcgccgcaggt
caggttctcgccgtcacgttcacctcgcgcgccgcgggggagatgcgggcgcggctgcgc
agcctgggcatcggcgggggcgacgggcagccgggcgtccaggccgtcaccttccacgcc
gccgcgatgcggcagctgcgctacttctggccccgcgccatcggagacacccgctgggag
ctgctcgacaacaagttccccgtgatcggccgcgccgcccgcgactgcgacctgcggccc
gagaccgacaccatccgcgacctgctcagcgagatcgactgggcgaaggcctcgctcgtc
acgcccgagacctacgcgaaggccgtcgaggacgcgggccgcaccgcccccatggcaccg
ggcaccgtcgccgacgtctacgcggcctacgagcggcgcaagaccgaccaggacggcaac
cgcctgctcgacttcgacgacctgatcctggtcacggccgcgatcctcgaggacaaccac
gtggtcgcggaggagttccgcgaccgctaccgcagcttcgtcgtcgacgagtaccaggac
gtcacgcccctgcagcagcagctcctcaacgcctggctcggcgaccgcgacgacctcacg
gtggtgggggacgcgaaccagaccatctattcgttcaccggcgccaccccgaactacctg
ctcgacttcacgcgccgcttcgaggacgccaccatcgtccggctgcagcgcgactaccgc
tccactccgcaggtcgtggcgctcgccaacaaggtgatcggtgctgcacagggccgcgtc
gccggcacgcgcctcgagctcatcggacagcgtcccgacgggccggcgccgatctacgcc
gaggtcgacgacgagccggcggaggcgaagctcgtcgccaagcgcatccgcgaactgctg
gccaagggcgtccccgccagcgagatcgccatcctctaccggatcaacgcccagtcggcc
gtgcacgaagccgcgctcaccgaggccggcatcccgtaccaggtgcgcgggggcagcgcc
ttcttcgagcggcccgagatcggccaggccgtgcgcgcgctcatggagcgcgcgggccag
ttcggcggcgtggcgggcgacgagctgctgtccctggtcaagggtgccctggagccgctc
ggcctcaccccggaggcgcccgacggtgcccgtgccctcgagcggtggcaggcgctcggc
gcgctggtcgagctgaccgccgacctggcgaaggagcggccggggctcacgctggccgag
ctcatcggcgagctccgagcccgcgccgaggccaagcatccgcccacgatgcagggcgtc
acgctgtcgtcgctgcacgcggcgaagggcctggagtgggacgcggtcttcctcgtcggc
ctgaccgagggctccgtgccgatctcgcaggccatcgccaagggcgatccggagccgatc
gaggaggagcgccgcctgctctacgtgggcgtcacccgtgcccgggagcacctgcacctg
tcgtgggcgctcgcccgcaacgagggcggccgcaagacgcgcaagcgcacccggttcctc
gacgtcgtcgccggccaggccgacgccgggaggccgcgcgccgactccgggcccagcaag
ggcaagcgccgctcgtcggacatctgccgcgtctgcggcggcatcctcgacacccgtgag
gagaagctccggtcgcgctgcgaggactgcccgtcggatctcaacgacgagctcgtcgag
gccctgaagatctggcggaccggccaggcccgcgaccagcaggtcccgccgtacacgatc
ttctccaacgcgacgctgttcgccatcgccgagcaccagccgcgcacccgcgcccagctg
gtgcggatcaacggcatcggctcgacgaaggtggacaagtacggcgacgaggtgctcgcg
ctcgtctccgagcacgcctga
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