Tsukamurella tyrosinosolvens: ASU32_17395
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Entry
ASU32_17395 CDS
T05267
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tsm
Tsukamurella tyrosinosolvens
Pathway
tsm03420
Nucleotide excision repair
tsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASU32_17395
03430 Mismatch repair
ASU32_17395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsm03400
]
ASU32_17395
Enzymes [BR:
tsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ASU32_17395
DNA repair and recombination proteins [BR:
tsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASU32_17395
MMR (mismatch excision repair)
Other MMR factors
ASU32_17395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUN41565
LinkDB
All DBs
Position
complement(3559104..3562445)
Genome browser
AA seq
1113 aa
AA seq
DB search
MTEGFPHAPLISAVDLAHELGQAFAPTDEQRAVIEAPLGPCLVVAGAGAGKTETMAGRVV
WLIANRYVTPDQVLGLTFTRKAAQQLMIRVRKRLARLAGAPVVDRIDPSGELRSSLRTVE
PEISTYHAYAGRLLGDYGMLLPVEPSVRLVSETERWQIAYDVVTGWDEALELDRNPANLT
EWVLGLSGALADHLVTPDQLEADDDELERLIGLLPPGPRQRAAPNAALLKAAEVQEQRRR
LIPLVRAVAAEMRAREVLDFGSQMGLAAQLALANPDVAGLERARFGAVLLDEYQDTGHAQ
RMLLASLFGGPAGAAAVTAVGDPIQSIYGWRGASAANLPRFATDFPQADGAPAPRRELLT
SWRNPTSALSLANAVSEDLRSRGVPVSELKARPDAPEGDLRIALHSTVIDERDWVADAIA
EQWRGRIEAGEAPPTVAVLVRRNADSAGIATALGERGVPVEVVGLGGLLSTPEVQDVVAL
LRLAVEPLAGTAAMRLLTGPRWQLGAADLRALWNRARRIAHTTGRAAAGAVATPEQLDAA
LDATLPSESLDAAGLGDAIADPGPDSDYSAAGLGKIRSLDREVRHVRERLGHPLPEVVAE
AERVLGVSIETRIRASRQLGGRATGREHLDAFADVVVSYAERPTATLPGLLAFLAAAEKV
EGGLTPGDVEVATDRVQVLTVHSAKGLEWDVVAVPHLSEGIFPSNRALPTWLSTPAELQP
NLRGDLAEPGGSVDDGPARSAPGAGDGVPRLDLDGCNNRKDLEDALDAHRKALKGMNMHE
DERLFYVAVTRTQSVLLLSGHYWSEDVKTPKAPSRFLVAARDHAPDAVAEWAGEPLEDAP
NPLETEPIRLPWPRDFLGAHRAEVDAGAELVLAELGRGAAEPDPEEPDPYGWAAEVTALL
AERARQAQAELEVAVPREVSVSQLVELRRSPATFASRLRRPVPFKPNPYARRGTAFHAWL
ERRYGASRLLDLDELPGAADGDAGADENLALLQRRFEESEWAARTPVDIEVPFEIAAAGT
VVRGRMDAVFRDPGGGFTVVDWKTGVRPTEPADERAAAVQLAAYRLAWARLRDVPVDDVR
AAFFYVRSGETVAPSDLLEHQGLADLITSAGEG
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgactgagggattcccgcacgcgccgctgatctcggcggtggacctggcccacgagctg
gggcaggccttcgcgccgacggacgagcagcgtgccgtcatcgaggcaccgctcggcccg
tgcctcgtcgtcgccggtgcgggcgcgggcaagacggagacgatggccggtcgcgtcgtg
tggctcatcgcgaaccgttacgtcacgcccgaccaggtgctcggcctcaccttcacccgg
aaggccgcgcagcagttgatgatccgcgtgcgcaagcggctcgcccggctggccggggcg
cccgtcgtggaccggatcgacccgtcgggcgagctgcggtcgtcgctgcgcaccgtcgaa
cccgagatcagcacgtaccacgcctacgcgggtcggttgctcggcgactacggcatgctg
ctgcccgtcgagccgtcggtgcggctggtctcggagacggagcggtggcagatcgcgtac
gacgtggtcaccgggtgggacgaggcgctggagctggaccggaacccggcgaacctcacg
gagtgggtgctcgggctgtcgggggcgctcgccgaccacctcgtcacgcccgatcagctg
gaggccgacgacgacgagctggagcggctcatcggcctgctcccgccggggccgcggcag
cgggcggcccccaacgcggcgctgctcaaggccgccgaggtgcaggagcagcggcgccgg
ctgatcccgctggtgcgggccgtggccgcggagatgcgggcccgcgaggtcctcgacttc
ggcagccagatggggctggccgcgcagctggcgctcgccaatcccgatgtcgcgggtctc
gagcgcgcccggttcggggcggtcctgctcgacgagtaccaggacaccgggcacgcgcag
cggatgctgctggcgtcgctgttcggcggcccggcgggcgccgccgccgtgaccgcggtg
ggcgacccgatccagtcgatctacggctggcgcggggcgtcggcggcgaacctgccccgg
ttcgccacggacttcccgcaggcggacggggcgcccgcaccgcgccgcgaactgctgacc
agctggcgcaatccgacgagcgcgctcagcctcgccaacgccgtctccgaggacctgcgc
agccgcggcgtccccgtctccgagctcaaggcgcggcccgacgcgccggagggcgacctg
cggatcgccctgcactccacggtgatcgacgagcgggactgggtcgccgacgcgatcgcg
gagcagtggcgcggccggatcgaggcgggggaggcgccgccgacggtcgcggtgctcgtg
cgccgcaacgccgactcggccggcatcgccaccgccctcggcgagcgcggcgtgcccgtg
gaggtggtgggcctgggcggactgctgagcacccccgaggtgcaggacgtcgtggcgctg
ctgcggctggccgtcgagccgctcgcggggaccgccgcgatgcggctgctcaccgggccg
cgctggcagctcggcgccgccgacctgcgggccctgtggaaccgcgcgcgccggatcgcg
cacacgacgggccgcgcggccgcgggcgccgtcgccacgccggagcagctcgacgccgcc
ctcgacgcgacgctgccctccgagagcctcgacgccgccgggctcggcgacgcgatcgcc
gaccccgggccggactccgactactccgccgcgggcctggggaagatccggtccctcgac
cgcgaggtgcggcacgtccgcgaacgcctcgggcatccgctgcccgaggtcgtggccgag
gccgagcgcgtgctgggcgtgagcatcgagacccgcatccgcgcgtcccggcagctcggc
ggccgcgccaccggccgcgagcacctcgacgccttcgccgacgtggtcgtctcgtacgcc
gagcggcccaccgccaccctgcccggcctgctcgccttcctcgccgccgcggagaaggtg
gagggcggcctcaccccgggcgacgtggaggtcgccaccgaccgggtgcaggtgctcacg
gtgcactccgcgaagggcctcgaatgggacgtggtggcagtgccgcacctgtccgagggc
atcttcccgtcgaaccgggctctgcccacctggctctcgacgcccgccgagctgcagccg
aacctgcgtggtgacctcgccgagcccggcggctccgttgacgatgggcccgctcgctcc
gctcccggcgccggtgacggcgtgccccgcctcgacctcgacggttgcaacaatcgcaag
gatcttgaagacgccctggacgcccaccgcaaggcgctcaagggcatgaacatgcacgag
gacgagcgcctgttctacgtcgccgtcacccgcacccagtcggtgctcctgctgtccggg
cactactggagcgaggatgtgaagacgccgaaggcgccgtcgcgcttcctcgtcgcggcg
cgcgatcacgccccggacgcggtggcggagtgggccggggagcccctcgaggacgcgccg
aacccgctggagaccgagccgatccggctgccctggccgcgcgacttcctcggcgcccac
cgcgcggaggtggacgcgggcgccgagctggtgctcgccgagctcggccgcggtgccgcg
gaacccgatcccgaggagcccgacccgtacggctgggccgcggaggtcacggccctgctg
gccgagcgggcccggcaggcgcaggcggagctggaggtcgcggtgccgcgggaggtctcg
gtgagccagctggtggagctgcgccgcagccccgccacgttcgcgagccggctgcgccgg
cccgtgccgttcaagccgaacccgtacgcgcggcgcggcaccgccttccacgcctggctc
gagcgccgctacggcgcgtcgcggctgctggacctcgacgagctgcccggcgcggccgac
ggggacgccggcgccgacgagaatctggcgctcctgcagcggcggttcgaggagagcgag
tgggcggcgcgcacccccgtcgacatcgaggtgccgttcgagatcgcggccgccgggacc
gtcgtgcgcgggcggatggacgccgtcttccgcgacccgggcggcggcttcaccgtcgtc
gactggaagacgggcgtgcggcccaccgaacccgccgacgaacgcgccgccgcggtccag
ctcgccgcgtaccggctggcgtgggcccgcctgcgcgacgtgcccgtcgacgacgtgcgg
gcggcgttcttctacgtccgctccggggagacggtggcaccgtcggacctgctcgagcac
cagggcctggcggacctgatcacgagcgcgggggagggctag
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