Candidatus Pseudothioglobus singularis: W908_00880
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Entry
W908_00880 CDS
T04071
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tsn
Candidatus Pseudothioglobus singularis
Pathway
tsn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
W908_00880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsn02000
]
W908_00880
Transporters [BR:
tsn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
W908_00880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ALE01287
UniProt:
A0A0M4LYW2
LinkDB
All DBs
Position
178627..179685
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AA seq
352 aa
AA seq
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MNKYLKIVCLTLLMGMGFGLSNIAKADGHSVMFASWGGSFQDALRTTMLTPAAEKLGIEV
EEDTTNGIQDVRSQISAGAVSWDVTEQELSVCETLKQEDSLEPLDYSLINSAGIPPELVN
SHYVGLLAFTKVISYRQDKFGDNGPQSWADFWDVEKFPGKRGMHGKVNYNLEAALMADGV
PKSEIYNVLSTKKGQERAWAKLAEIVPHVTVWYRGGAQSAQLMRDGEVDMIHMGQNHVGY
INESGIGVNFTFDGGTMDVDCLLVPKGAPNKDNAMRLINEMVSAEAQARLVKIMPFGTAN
SGAYSVGILTEDEATKLPTYPDNYAQQLVIDPSFYIGQLSELTERFDMLIQQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtatttaaaaatagtgtgcttaacactattaatgggaatgggatttggcctt
agtaatatcgctaaagccgacggacattctgtcatgtttgcttcatggggtggatctttt
caagatgcacttagaacaactatgcttacaccagcagcagaaaaattaggtattgaggtt
gaagaggatacgacaaacggcatacaagacgtacgcagtcaaattagtgctggcgcagtc
tcttgggatgttactgaacaagagctgtcagtttgtgagacactaaaacaggaagactca
cttgagccactggattatagtcttattaattctgcaggcattcctccagagcttgtcaac
agtcactatgtgggcttgcttgcatttacaaaggtaatatcatataggcaagataagttt
ggtgataatggaccacaaagctgggcagatttttgggatgttgaaaaattcccaggaaag
cgtggtatgcatggaaaagttaactacaacttagaagctgctcttatggctgatggtgtg
cctaagagtgaaatttataatgttctttctactaagaaaggtcaggagcgtgcttgggct
aaacttgctgaaattgttccacatgtgacagtatggtatcgtggtggagctcagtctgca
caacttatgcgtgatggtgaggttgatatgattcatatgggacaaaatcatgtgggatat
attaatgaatctggtatcggagtgaatttcacctttgatggtggaacgatggatgttgat
tgtcttcttgtaccaaaaggagcacccaacaaagataatgcgatgcgtttaattaatgaa
atggttagcgcagaagcacaggcaagactggtcaagattatgccttttggaactgcgaat
agtggagcctatagtgttggcattctaacagaagatgaagcaactaaactgcctacatac
cctgataactatgctcagcaactagtcattgatccaagcttttatatcggacagctcagt
gagttaactgaaagatttgatatgttgatccagcagtaa
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