Candidatus Pseudothioglobus singularis: W908_00890
Help
Entry
W908_00890 CDS
T04071
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tsn
Candidatus Pseudothioglobus singularis
Pathway
tsn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
W908_00890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsn02000
]
W908_00890
Transporters [BR:
tsn02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
W908_00890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ALE01289
UniProt:
A0A0M4LFF7
LinkDB
All DBs
Position
180661..181719
Genome browser
AA seq
352 aa
AA seq
DB search
MNKYLKIVCLTLLMGMGFGLSNIAKADGHSVMFASWGGSFQDALRSSMLAPAAQDLGIEV
KEDTTNGIQDVRAQISANAVAWDVAEMELSACETLSRDGMLEPIDYKMVDASGIPSDLRQ
DNYIGFINFTKVIAYRKDKFGDNGPQSWADFWDVEKFPGKRGMHGKVNYNLEAALMADGV
PKSEIYNVLSTKKGQERAWAKLAEIVPHVTVWYRGGSQSAQILRDGEVDVVHMGHNRVES
VANSGVDVAYTFQDGTMDVDCLLVPKGAPNYSNAMKLINSVLSASSQATLAKTMPLGPVN
KYAFDAGVLSIEQAKNVNTHPDNYDKQLLVDPNFYIGQLDVLTERFDTLIQQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtatttaaaaatagtgtgcttaacactattaatgggaatgggatttggcctt
agtaatatcgctaaagccgacggacattctgtcatgtttgcttcatggggtggatctttt
caagatgcgcttagatcttcaatgctagctcccgctgcccaagatttaggtattgaagtt
aaagaagatacaaccaatggtattcaagatgtccgtgctcagatttcagctaatgctgtt
gcctgggatgtagcggaaatggaattatctgcttgtgaaacactttcaagagatggtatg
ttagagcctatcgactacaaaatggtggatgcttcaggaatcccatctgatttgcgacaa
gataactatattggctttattaacttcactaaagtcattgcctacagaaaagataagttt
ggtgataatggaccacaaagctgggcagatttttgggatgttgaaaaattcccaggaaag
cgtggtatgcatggaaaagttaactacaacttagaagctgctcttatggctgatggtgtg
cctaagagtgaaatttataatgttctttctactaagaaaggtcaggagcgtgcttgggct
aaacttgctgaaattgttccacatgtgacagtatggtatcgtggtggttctcaatcagcg
cagattcttcgcgatggtgaagttgatgtagtccatatgggtcataatcgagttgagagt
gttgcaaactctggcgttgatgtagcttatactttccaagatggcacgatggatgttgat
tgtcttctcgttccaaaaggtgcgccaaattattctaatgcaatgaagcttataaactct
gtattatcagcttcatctcaagctacattagctaaaacaatgcctcttggccctgtaaac
aagtatgcatttgatgcaggtgtactaagcattgaacaagcaaaaaatgttaatactcat
ccagataattatgacaagcaattgttagttgatccaaatttctatattggtcaactagat
gttctaacagagcgctttgatacactaatccagcaatag
DBGET
integrated database retrieval system
