Candidatus Pseudothioglobus singularis: W908_01490
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Entry
W908_01490 CDS
T04071
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tsn
Candidatus Pseudothioglobus singularis
Pathway
tsn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
W908_01490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsn03021
]
W908_01490
03400 DNA repair and recombination proteins [BR:
tsn03400
]
W908_01490
Enzymes [BR:
tsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
W908_01490
Transcription machinery [BR:
tsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
W908_01490
DNA repair and recombination proteins [BR:
tsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
W908_01490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ALE01394
UniProt:
A0A0M4LCE7
LinkDB
All DBs
Position
287687..288667
Genome browser
AA seq
326 aa
AA seq
DB search
MQGSARDFLKPKLVDSVELSKNEYRVVLEPFERGFGHTLGNSIRRTLLSSMVGSAITEVA
IDGVMHEFSTIEGVQEDVLDILLNLKEASIGLNASESATVIIEKEGPCELTVADIEANGT
DVSVFNPEKVIATVNEGGKIRMTLGVGTGVGYDVAVARNVDSETIGSIQLDASFSPIKRV
SFTVEAARVEQKVNLDRLNIVIETNGSVDAEEAVKRAATILQDQLSSFVELEPVIEEEPQ
PTSDDFPPMYLSAVDELELTVRSANCLKAEQIYYIGDLIQKSEQDLLRTPNLGRKSLNEI
KEVLTEKNLELGTEIENWPPVDLMSE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaagtgcaagagattttttaaaaccaaaactagtcgattctgttgaattatct
aagaatgaatatcgtgttgttctagaaccttttgagcgtggatttggccatacattagga
aactcaataagaagaactttattgtcctcaatggttggctctgctattacagaagttgct
attgatggtgttatgcatgagttttcaacaattgaaggcgtgcaggaagatgttctagat
atccttcttaacttaaaagaagcatcaatcggtcttaatgcaagtgagagcgctacagta
atcattgagaaagaaggtccatgcgagctaactgttgctgacattgaggcaaatggaact
gacgtttcagtatttaaccctgaaaaagtgattgcaacggttaatgaaggtggaaaaatc
agaatgactcttggagtcggtactggtgttggctatgacgtcgcagttgcaaggaatgtt
gactctgaaaccatcggcagtattcagttggatgctagtttttctccaatcaaaagagtt
agttttactgttgaagcggccagggttgagcaaaaagttaaccttgacagacttaacatt
gttatcgagactaatggttctgttgatgcagaagaagcagttaaaagagctgctactatt
ttgcaagatcaattgtcatcatttgttgagcttgagccagttattgaagaagagcctcaa
ccaacatcagatgatttcccaccgatgtatttgtctgcagttgatgagttagagttgaca
gttcgttctgcaaactgcttaaaggcagagcaaatctattacattggtgatttaattcaa
aaatcagagcaagacttattgagaacacctaacttaggccgtaagtcgcttaatgaaatt
aaagaagttttaactgaaaagaacttagagctaggtactgaaattgaaaactggccacca
gttgacttaatgagtgaataa
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