Candidatus Pseudothioglobus singularis: W908_02280
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Entry
W908_02280 CDS
T04071
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tsn
Candidatus Pseudothioglobus singularis
Pathway
tsn03030
DNA replication
tsn03430
Mismatch repair
tsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
W908_02280
03430 Mismatch repair
W908_02280
03440 Homologous recombination
W908_02280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsn03032
]
W908_02280
03400 DNA repair and recombination proteins [BR:
tsn03400
]
W908_02280
Enzymes [BR:
tsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
W908_02280
DNA replication proteins [BR:
tsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
W908_02280
DNA repair and recombination proteins [BR:
tsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
W908_02280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ALE01533
UniProt:
A0A0M4L3J5
LinkDB
All DBs
Position
449219..452629
Genome browser
AA seq
1136 aa
AA seq
DB search
MNSVDFVHLQCQSEYSVKNSLVRISNLIDSVKDLGMKSVALTDDMSLFSAIKFYQKAINA
GIKPIIGAKISLSYEEGHYDVLLLCQNHEGYLNLSELISKAYLNEQGISIVSVTEEQLIT
HQKGLLMIASPASSDISKYLLSNNFEIAKKTALKWKSVFKDRYYMSVQRTERPLDESLLN
LIIDLGLEVEVPIVATNDVQFIDQNDFEAHEARICIAEGGLLDDARRSKNFSNHQYLKTS
EEMLLLFEDYPQVIKNSSEIAKRCNLHFELFEKNYLPLFPTPEGMSIADFFSQESKKGLE
VRLKDLEVNKKFYIERLNFELSVILEMDFPGYFLIVSDFIRWAKENGIPVGPGRGSGAGS
LVAWALSITNVDPIEHDLLFERFLNPERISMPDFDIDFCTDRRDEVIAYVAEKYGSEKVS
QIITYGTMAAKGVVRDVGRVLGHPYGFSDQISKMIPNELKMTLDKALVDSVELKSRYDSE
ESVSTLIDLSQDLEGIIRNVGTHAGGVVIAPSKISDFCPIYKGSDESDVVVSQFDKDDVE
AVGLVKFDFLGLSNLTVMDKAVKIIAKKGLSKELIDIDKLKLDDPKVFKLLQDCDTTGVF
QLESEGMRGYLKKLKADCFEDIVAMLALYRPGPLDAGMVDDYIQVKHGAKVRYPHQMLEE
ILKPTNGVFLYQEQVMKSAQIMAGYSLGGADILRRAMGKKKVEEMAQQREVFVNGASKKN
IDEKKANEIFDLIDKFSGYGFNKSHSVAYAYISYQTAWLKAHFPAPFMAAVLSGVMDDTD
RVAFTVGESKKKGVKVISPDINQSEYEFSINDNKTIVYGLGAIKGVGEALVNEIVLEREQ
NGDYLDIFDFCFRIQKKYLNRRAIEALIYAGAFDIFDIKRATLISTYPSAVRQAEQRQSD
LSKGQSSLFSDVDSHIEYEKKYIKGDFLSFKNIMMYEKKVMGYYLDRHPTDWYKADLKSI
VCTLPKDIVFRNNRDVRILSLISDIVYRNTRKGQMASITIEDSERKINAAIFSQKLAQTS
EKLVLDEVVVISGKVNKDFREQWQVVVDRVDSVDKVQLKFAKYLKIHLSQKNKNDYIELC
SLLKEYHGSCPVIIEYESEQSSGRIPLSEEFDVSLDRELLDSIEKKLGHGKYKINY
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgtggattttgttcatcttcaatgccaaagcgaatattctgtaaagaatagt
ttagttcgcatatcaaatctgattgatagtgtgaaagatttaggtatgaaaagtgtcgca
cttacagatgatatgagtcttttttcagcaattaaattttatcaaaaagctattaatgct
ggaataaagccaatcattggagcaaagatttcattgtcttatgaagagggtcattatgat
gttcttttgctttgccagaatcatgaaggatacttgaacctttctgagcttatttcaaaa
gcctatttgaatgaacaaggcatttctattgtaagtgttacagaagagcaactgataact
catcagaaaggcttattaatgattgcatctcctgcctcttcagacatttcaaaatatctg
ttatctaataattttgagattgcaaaaaaaacagctttgaagtggaagtctgtttttaag
gatcgctactacatgtcagttcagagaactgaaaggccattggatgaaagcttacttaac
ctaataattgatttaggattagaagtagaggttccaattgtagcgactaatgatgtccag
tttatagatcaaaatgacttcgaagctcacgaagctagaatttgtattgcggaaggtgga
ttattagatgatgcaagaagatctaaaaactttagtaaccaccaatatttgaaaacttct
gaagaaatgttgttgttgtttgaggattaccctcaagttattaaaaatagctctgaaatt
gcaaagcgttgtaatcttcattttgaactttttgagaagaactatcttccactttttcca
acaccagagggtatgtcaattgctgatttttttagtcaagagtcaaaaaaaggtcttgaa
gttagacttaaagaccttgaagtgaataaaaaattttatattgaaagattaaattttgaa
ctttcagtaatattagaaatggactttccaggttattttttaattgtttctgatttcatc
agatgggcaaaagaaaatggcattcctgtgggtccggggcgaggctctggagctggatct
cttgttgcatgggccctttcaattacaaatgttgatccaattgagcatgatcttttattc
gaacgttttttaaatcctgagcgtatttctatgccagattttgatatagatttttgtaca
gataggcgtgatgaagttattgcgtacgttgctgaaaaatatggatctgaaaaagtttct
caaataattacttatggaactatggctgcaaaaggagttgttagggatgttggaagagtg
cttggccatccttatggatttagcgatcaaatatcaaaaatgattccaaatgagttaaaa
atgaccttggataaagccctcgtggattccgtagaactaaaatctagatatgattcagaa
gaaagtgtatcaaccttgatagacttgtcacaagaccttgaaggaattattagaaatgtt
gggactcatgctggaggcgtggttattgcgccaagtaagattagtgacttctgtccaatc
tataaaggttctgatgaatcagatgtagtggtctcacaatttgataaagatgatgttgag
gctgtaggattagtcaagtttgactttctaggtctatcaaatttaactgtcatggataag
gcagtaaagatcatagccaaaaaaggccttagtaaggaattaattgatattgataaactg
aaactggatgatcctaaagtatttaagcttcttcaagattgtgatacaacaggtgttttt
cagctagagtctgaaggaatgcgtggttatttaaaaaaacttaaggcggactgttttgaa
gatattgtagccatgttagcgttatataggcctgggcctcttgatgcgggtatggttgat
gattatattcaagtaaagcatggtgcaaaggtgaggtacccacaccaaatgcttgaagaa
attctaaagccaactaatggtgtatttttatatcaagagcaggttatgaaatctgctcaa
attatggctggatactctttaggtggtgcagatatcttaagacgtgcaatgggtaaaaag
aaggttgaggagatggctcagcagcgtgaagtatttgtaaacggcgcctctaagaaaaat
attgatgagaaaaaagcaaatgaaatatttgatcttattgataagttctctggttatggg
ttcaataaatcccattcggtagcctacgcctatatttcatatcagacggcatggcttaag
gctcactttccagcgccatttatggccgctgttttgtccggcgttatggatgatactgat
cgagttgcttttacagttggagagtcaaagaaaaaaggagttaaagttatttctccagat
atcaatcaatcagagtatgaatttagtataaatgataataaaacaattgtttatggtctt
ggagcaatcaaaggggttggtgaggcgctggtaaatgaaattgtccttgaaagagaacaa
aatggtgactatttagatatttttgatttttgctttcgaatacagaaaaaatatttaaac
cgcagggctattgaagcgcttatttatgctggtgcatttgatatctttgatattaaaaga
gctactttaatatcaacttatccaagtgcggtcagacaagcagagcaaagacaaagtgat
ctatcaaaaggccaaagtagtcttttttctgatgttgatagtcatattgagtatgaaaag
aaatacataaaaggtgattttttatcttttaaaaatattatgatgtatgaaaaaaaggtc
atgggttactatttagatcgacatcctactgactggtataaagcagacttaaagtcaatt
gtttgcacgttaccaaaagacattgtgtttagaaataatcgagatgtaagaatactatct
cttatatctgacattgtttacagaaatacaagaaaaggacagatggctagcataactatt
gaagattcagaaagaaagataaatgcagcaattttttctcaaaagttagcgcaaactagt
gaaaaattagttttagacgaggtggtggtcatttctggaaaagtcaataaagattttaga
gaacagtggcaagttgttgtagacagagtagattcagtagataaagttcaattaaaattt
gcaaaatatttaaaaattcatctgagtcaaaaaaataaaaatgactatatagagttatgt
agtttgctaaaagaatatcatggatcttgcccagtgattatagagtacgaatcagaacaa
tcttcaggaagaataccattatcagaggagtttgatgtatcactggatcgagaattgcta
gattcaattgaaaaaaaattagggcacgggaaatacaagattaactattaa
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