Candidatus Pseudothioglobus singularis: W908_03735
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Entry
W908_03735 CDS
T04071
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tsn
Candidatus Pseudothioglobus singularis
Pathway
tsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
W908_03735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsn03019
]
W908_03735
03016 Transfer RNA biogenesis [BR:
tsn03016
]
W908_03735
Enzymes [BR:
tsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
W908_03735
Messenger RNA biogenesis [BR:
tsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
W908_03735
Transfer RNA biogenesis [BR:
tsn03016
]
Prokaryotic type
tRNA degradation factors
W908_03735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
OB_RRP5_4th
OB_PDCD11
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
ALE01763
UniProt:
A0A0M4L571
LinkDB
All DBs
Position
complement(723822..725912)
Genome browser
AA seq
696 aa
AA seq
DB search
MDMNIVQKSFTFGNSQITFETGRVARQAHGAVLASMDDTQVLVSVVGAKEAKPGQSFFPL
SVDYIEKTYAAGKIPGGFLKREGRPSEKETLTSRLIDRPIRPLFPNGYMNEVQVMIQVIS
ANKNVDPDVLAMLGTSAALAISGVPFKGPIGAARVGFKDGSYMVNPTYSELETSELDMVV
AGTKDAVLMVESEASELSEEVMLGGVMYAHEQFQVVIDNVAEFAKEVGIAPREWVAPADN
ETLLTSIKSKFESQIAEAYQTVDKMERYEKMGEVKDAALEEFVSEDDSISQDEVKNYIKK
IEKSTVRERILAGEPRIDGRDNSTVRELAIETGVLENTHGSALFTRGETQALVVTTLGSK
RDAQLIEKLESNDRIEDHFMLHYNFPPYCVGETGRVMGVKRREVGHGRLARRGISACLPN
LEEFPYTIRVVSEITESNGSSSMASVCGSSLSLMDAGVPLKAPVAGIAMGLVKDDERFTV
LTDILGDEDHLGDMDFKVAGTTKGINALQMDIKIDGITEDIMSIALKQAKDARLNILGQM
NEVISEPNSASKNAPKTKVIKIPTDKIRDVIGKGGETIRGIVAQSGASVDVDDDGNVNVF
ANDSESFEKAVQMVKDVTAVPEVNKVYMGKVAKIVEFGAFITIMPNQDGLLHVSEIAHER
VEKVEDYLKEGEEIEVKVLGIDRGRIKLSRKVLIEK
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaatatagttcaaaaaagttttacgtttggcaatagtcaaattactttcgaa
actggcagggttgcaagacaggcgcatggcgctgtcttagcaagcatggatgacacacaa
gtactagtcagtgttgttggtgcaaaagaagcaaagccaggtcaatcattcttcccttta
tcggtagactacattgaaaaaacatatgctgctggaaaaattccaggaggtttccttaaa
agagaaggtagacctagtgaaaaagaaacactaacttctagactaattgatcgccctatt
cgtccactatttccaaatggctacatgaatgaagtacaggtaatgatccaagtaatctct
gctaacaaaaatgttgatccagatgttctagctatgcttggaacttcagctgcactggca
atttctggtgttccttttaaaggcccaattggtgctgcgcgtgttggctttaaagatgga
agctatatggttaatccaacctattcagaattagagacgtctgagttagatatggttgtg
gcaggaactaaggatgcagtattaatggttgagtcagaagcaagtgaactctcagaagaa
gttatgcttggaggtgtcatgtatgctcatgagcaatttcaagtagtaattgataacgtt
gctgaatttgccaaagaagttggtattgctcctcgcgaatgggttgctccagcagacaat
gagaccctattgacatcaatcaaatctaaatttgaaagtcaaattgctgaagcttatcaa
actgttgataagatggagcgttatgaaaaaatgggtgaagttaaagatgctgcattagaa
gagtttgtgagtgaagatgactcaataagccaagatgaagttaaaaattatattaaaaaa
attgaaaaatcaactgttagagagagaattttagctggcgaaccaagaattgatggcaga
gataactcaactgttagagagcttgcaatcgaaactggggttcttgaaaatacgcacggc
tctgctcttttcacaagaggtgaaactcaggctttagttgttactactctggggtctaag
agagacgcgcagttaattgaaaaactggaatcgaatgaccgaattgaagatcatttcatg
cttcattacaacttccctccttactgtgttggtgagacgggcagagttatgggcgttaag
agacgtgaagttggtcacggaagacttgcgcgcagaggcatctcagcgtgtcttccaaat
ttagaggaatttccatacactatcagagttgtttctgaaattacagagtcaaatggatct
agctctatggcaagtgtctgtggttcgtcactatctctgatggatgcaggagtcccacta
aaggcaccagttgcaggtattgcaatgggcttagtaaaagatgatgaacgctttacagtt
cttacagacatcttaggtgacgaggatcacctgggtgacatggactttaaggttgcagga
accacaaaaggtattaatgcccttcaaatggatattaagatagatggtatcactgaagac
attatgtctattgcccttaagcaagccaaagatgcaagacttaatattcttggtcaaatg
aatgaagttatttcagagcctaattcggcttccaagaatgcccctaaaactaaagttatc
aaaataccgactgataagatcagagatgttattggaaaaggtggtgagactattagagga
attgttgctcaatctggagctagtgtagatgttgacgatgatggaaatgttaatgttttt
gctaatgactctgaaagctttgaaaaagcagttcaaatggtcaaggacgtaactgctgtt
cctgaagtcaataaagtttacatgggcaaggttgccaaaatagttgaatttggagctttt
attacaatcatgcctaatcaagatggcctcttacatgtttctgaaattgctcatgagaga
gttgagaaagttgaagactatcttaaagaaggtgaagaaattgaagttaaggttcttggg
atagaccgaggacgaatcaaactttcgagaaaagttctaatagagaagtaa
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