Candidatus Pseudothioglobus singularis: W908_04185
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Entry
W908_04185 CDS
T04071
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
tsn
Candidatus Pseudothioglobus singularis
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsn03021
]
W908_04185
Transcription machinery [BR:
tsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
W908_04185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Glyco_hydro_77
GntR
UCR_14kD
KORA
HTH_3
SWC7
Sua5_C
SpoIIID
HTH_11
CIDE-N
Phage_AlpA
Motif
Other DBs
NCBI-ProteinID:
ALE01847
UniProt:
A0A0M4LPK6
LinkDB
All DBs
Position
complement(821668..822495)
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AA seq
275 aa
AA seq
DB search
MSDLALSIKKVSRDLEVQKYPPILSPEEEYNLALELYEDGSLSAAQKLVLAHMRFVAFVA
HGYKGYGLEQADLIQEGTIGLMKAVKRFNPHKKVRLSSFAVYWIRAEIHEYIFKNWKIVK
VATTKAQRKLFFKLKQAKSNIFQSLTSEQAKVIAEDLGVREKDVIEMESRLQLNDVAFEV
NDDEDTYTPEHYISDPGKNPEQLVVSNKSQEDQHNRLYQALSSLDERSIDILQARYLKEE
KLTLHTLADKYGVSAERVRQLENKAIKKLKERLEE
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatttagcattatcgataaaaaaagtatctagagatctagaggtacaaaagtat
ccgcctattctctcaccagaagaggaatataaccttgctctcgaactttacgaagatgga
agcttatctgcagcacaaaagttagtcctagctcacatgcgctttgtagcgtttgttgct
cacggctataaaggctatggactcgagcaagcagatttaattcaagaaggcacaatcggt
ttaatgaaggcagttaaacgcttcaatcctcataaaaaagtgaggctttcatcatttgct
gtttactggatacgtgctgaaattcatgaatatattttcaaaaattggaaaattgtgaag
gttgcaacaacaaaagcacaaagaaaactctttttcaaactcaagcaagctaagtctaac
atatttcaatctttaaccagtgagcaggcaaaagtaatcgcagaagatttaggtgttaga
gaaaaagatgttattgaaatggaatcaagacttcagctcaacgatgttgcgtttgaagta
aacgatgatgaagacacatacactcctgagcactacatatctgaccctggtaaaaatcca
gagcaattagtggtcagcaataaaagtcaagaagaccaacacaacaggctttatcaagct
ctttcttctttagatgagagaagtatcgatattttacaagctaggtacttgaaagaagaa
aaattgaccttacatactttagcagacaagtatggtgtttccgctgaaagggttcgtcaa
cttgaaaataaagctatcaaaaagcttaaagaacgtctagaagagtaa
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