Candidatus Pseudothioglobus singularis: W908_04420
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Entry
W908_04420 CDS
T04071
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tsn
Candidatus Pseudothioglobus singularis
Pathway
tsn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
W908_04420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsn03019
]
W908_04420
03009 Ribosome biogenesis [BR:
tsn03009
]
W908_04420
03036 Chromosome and associated proteins [BR:
tsn03036
]
W908_04420
Enzymes [BR:
tsn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
W908_04420
Messenger RNA biogenesis [BR:
tsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
W908_04420
Ribosome biogenesis [BR:
tsn03009
]
Eukaryotic type
90S particles
RNase
W908_04420
Prokaryotic type
rRNA processing factors
W908_04420
Chromosome and associated proteins [BR:
tsn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
W908_04420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
SCVP
Motif
Other DBs
NCBI-ProteinID:
ALE01889
UniProt:
A0A0M4LGQ0
LinkDB
All DBs
Position
complement(864406..865068)
Genome browser
AA seq
220 aa
AA seq
DB search
MEKLQKKFTYKFNDIALLKQALTHRSVSKSNNERLEFLGDSVLGCVISEELYLRYPLIDE
GQLSRLRSHLVRGQTLANLAKNLNISESLTLGHGELKSGGFRRESILADAFEAILGAIFL
DSDYVTVKNIILNLFNDLLNQAKPEDSLKDFKTQLQELLQKKGHSLPSYELIQTKGKDHN
AIFYVSCTVSELNLTSEKNAKSIKRAEQACAQSILEEILK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacttcaaaaaaaattcacttataaatttaacgatattgctcttctgaagcaa
gcgcttacgcatcgaagtgtcagcaagagtaataatgagcgacttgaatttttaggtgat
agtgttctagggtgcgttatttcggaagaactatacttacgctatcctttaattgatgaa
ggtcaactatcaagacttcgctctcatcttgtgagaggacaaactcttgcaaatttagcc
aaaaatctaaatatttctgaaagtctaacgttgggtcatggagaacttaaaagtgggggt
tttagacgtgaatcaatccttgctgacgcatttgaggcaatactgggcgctatctttctt
gattctgactatgtaactgtaaaaaatataatcctaaacctctttaatgacttacttaat
caggcgaaaccagaggattcattaaaagattttaaaactcaacttcaagagctacttcaa
aagaaagggcattctctgccaagctatgagctgattcagaccaaaggaaaagaccataat
gcaattttttatgtgagctgtactgtctcagaactcaatcttacttctgaaaaaaatgct
aaaagcatcaaaagggcagagcaggcttgtgctcagtcaattttagaggaaattttaaaa
taa
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