Candidatus Pseudothioglobus singularis: W908_06025
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Entry
W908_06025 CDS
T04071
Name
(GenBank) ABC transporter
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tsn
Candidatus Pseudothioglobus singularis
Pathway
tsn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
W908_06025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsn02000
]
W908_06025
Enzymes [BR:
tsn01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
W908_06025
Transporters [BR:
tsn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
W908_06025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_2
AAA_16
AAA
AAA_22
AAA_5
RsgA_GTPase
AAA_30
ResIII
MMR_HSR1
SRP54
AAA_29
AAA_25
AAA_14
AAA_7
TsaE
Zeta_toxin
DUF87
SH3_2
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALE02128
UniProt:
A0A0M5KRX8
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All DBs
Position
1170838..1172553
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AA seq
571 aa
AA seq
DB search
MGYRQFVKRIFPYLKNHLGKLVFTSIMMVFATLLETAIPEITGQIVDTLFSYNRANTAAF
SYSVILFSVIALSSLFALISISASSWISNKVIMDLRVNMFAKLLRLPKSYFDKNTTGETL
SKLTFDVEQISAAASTIWLQFIKSSFTVIILTGYLFYKSFLLSLSLIVLLPLVYLAVKFS
TSRIRKGSVSVQKSMGKMTHLLDENISGNDLIKIYQAQETETNKFFSIINTIRQQRFKVD
MAGGLNTSIVNALIGLSLAFVVFFSSTYLVMSAGDFLAYFTAMGMLVKPAKTLININKPL
QQAIVAGKSVFSLIDESPESNPSKNPIHSISGEICFDNVSFSYDNEKPSLTNVNLTIKKG
ETIALVGSTGSGKTTMVNLLTRFYNPSSGQILINGKDIVSYELESYRSNFSYVDQNVRLF
NDTISGNIAFGQKESMSIDLIRNAAKVSNSIEFIEKLDKTFDSDIGEDGVTLSGGQRQRL
SIARAIAKDSPILILDEATSALDSATEKLVQSAINKMQQDRTTIIIAHRLTTIQNADRII
VLKNGEIIEQGTHSELIKTSGEYSKLNQQQT
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgggctatagacaatttgtaaagaggatctttccatacctcaaaaatcatttaggaaaa
ttagttttcacatcgataatgatggtttttgcaaccttattagagacagctatacctgaa
attacaggccaaatagttgatacattattttcctataaccgtgctaatactgcagcattt
tcttattcagttatcttattttcagtcattgcactaagttcattatttgcactaatttct
atcagtgcaagctcctggatctccaataaagtaattatggatttgagagtcaatatgttt
gctaaattacttcgacttccaaaatcctattttgataaaaatactacgggagaaacacta
tcaaaacttacttttgatgtcgaacaaatatcggcagcagcctctactatttggcttcaa
tttattaaatcctccttcacagttattattcttacaggttacttattttacaaaagcttt
cttttaagtcttagcttgatagtccttcttccactagtatatttagctgtgaaattttct
acctccagaattagaaaaggctcagtaagtgttcaaaaatcaatgggcaaaatgacccac
ctactagacgaaaatatttctggcaatgatttaatcaaaatatatcaagcgcaagaaact
gaaacgaataaattttttagtattattaacacaatacgtcagcaaaggttcaaagtggat
atggctggtggtcttaatacctccattgttaatgcccttataggcttatctttggctttt
gttgtttttttctcatcaacctatttggtaatgagtgcgggtgactttttagcatacttt
acagcaatgggaatgcttgttaaaccagcaaaaacacttatcaatataaacaaacctctg
cagcaggcaatagtagctgggaaaagtgtgtttagcctgattgatgaatccccagaaagc
aacccaagcaagaatccaattcattcaatttctggtgagatatgttttgacaatgttagt
ttttcttatgataacgaaaagccttcattaactaatgttaatttaacaattaaaaaaggc
gagaccattgcattagttggatcaactggaagcggtaaaactacgatggttaatttatta
actcgcttttataatccatcatctggacaaatattaatcaatggaaaagatattgtttct
tatgagctagagtcttatagatctaatttctcatatgtggatcaaaatgtccgtcttttt
aatgacaccattagtggaaatattgcctttggtcaaaaagagtcaatgtcaatagattta
ataaggaatgcggcaaaagtatctaattcaattgagtttattgaaaaactagataagacg
tttgattctgatattggtgaagatggcgtaactctatctggcggacagcgtcaaagactt
tcaatagcaagagcaattgcaaaagatagccctatattgattcttgatgaagcaacctct
gcattagattcagcaacagaaaaacttgttcagtcggctattaataaaatgcaacaagat
agaactactattattattgcacatcgattaactacgatacaaaatgctgatcgaattatt
gttttaaaaaatggagaaatcattgaacaaggaactcattctgaacttataaagacttca
ggtgagtattcaaagttgaatcagcaacaaacttaa
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