Candidatus Pseudothioglobus singularis: W908_07260
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Entry
W908_07260 CDS
T04071
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tsn
Candidatus Pseudothioglobus singularis
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsn03016
]
W908_07260
Enzymes [BR:
tsn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
W908_07260
Transfer RNA biogenesis [BR:
tsn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
W908_07260
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ALE02779
UniProt:
A0A0M4M4H9
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Position
complement(1419747..1421558)
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AA seq
603 aa
AA seq
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MSKIGALVAYKSKPAKVVSATMHKYEITFSDGTSQKVREKDFRFIHPEFNTINQNCPDVD
ASILSDLDAESLPLQEITEWLFDDFTPQSAWYVYLMSEDSLYFYWNKDLLILRTPEQIQS
IKNQRKDKALEQESLNRCIKNLENNLFDGEDIFWINEVEQVALNQSKHSKVMSALSIENS
PENAHSLLLNINYWSEFNNPYPQRNKIYPDADLEFDAVKLDRKDLTHLTCLAIDNSYSSD
ADDAISIDGDRIWVHIADVASFVEIDSELDIFARKRVSNLYLPDQIFHMLPPRLSEACSL
GANDVSNAISIGFVLNEFEVHDIQIYLSEIKVTKMSYEVADEEINSNKTLASLNKIAIAH
KAHRDTNGAIQLNLPNTDIKLKDSKVHIFPQTVSESRSLVSEMMILAGRVIAEFSVENSI
SMPYLSQEPGNFSDEVIKNINNLSPLFRKEAARGFNRSKLSVKHSLHSGLGLEAYLRVTS
PMRRYLDLLVQQQLVRFLNKSDLLNDSDIKERIKVVNASVSKVNKATRQSVEHFRCLYFK
QNKQWEGEGVIVEVKGQKASVLIPELAMITQVKFKSKVELEEEIKLKVISSNLFERSIDF
KPL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaaaataggtgcactcgtagcatacaaaagtaaaccagcaaaagtggtctctgca
acaatgcataaatatgagatcactttttcagatggtactagccagaaagtaagagagaag
gattttcgttttattcaccctgaatttaatacaatcaaccaaaattgtcctgatgtagat
gcttcaattttgtccgatttggatgctgagtcattgccacttcaagagattactgagtgg
ctttttgatgactttaccccacaaagtgcctggtatgtttacttgatgagtgaagatagt
ttgtatttttactggaataaggatttattgattcttagaactccagagcaaattcaatca
attaagaatcaaagaaaagataaagcattagagcaagaaagcttaaataggtgtattaaa
aacctagaaaataatttatttgatggtgaggatattttttggattaatgaggtagaacag
gttgcccttaatcaatcgaagcactctaaggtaatgagtgctttatcaatcgaaaattca
ccagaaaatgcccactcgttacttcttaatattaattattggtcagagttcaataatccc
tacccacagagaaataaaatttatcctgatgcagatttagagtttgatgcagtcaagtta
gatagaaaagatttaactcacctgacgtgtcttgcaattgataatagctattccagtgat
gcagatgatgcaatcagtatcgatggagatagaatatgggttcatattgcagatgtagct
agttttgtagaaattgatagtgaacttgatatatttgcaaggaaaagggtatctaatctt
tatctcccagatcaaatttttcatatgcttccaccaaggctatctgaggcttgttccttg
ggagctaatgacgtgtcaaatgctatttcaattggattcgtgctcaatgaatttgaagtc
catgatatacaaatttacttgagtgaaattaaggtgacaaaaatgagctatgaggtagct
gatgaggaaatcaattcaaataaaactttagcttcattaaataaaatagctatagctcat
aaagctcatagagatactaatggcgccatccaactcaatcttccaaatacggatataaag
cttaaagatagtaaggttcacatttttcctcaaacagttagcgagagcagaagtttggtc
tcagagatgatgattcttgcggggcgagtcattgcagagttttcagttgagaatagtata
tcaatgccctatctatcgcaagagccaggaaatttcagtgatgaagttattaaaaatatt
aataacctttctcccctttttcgaaaagaggctgcaagagggtttaatagatctaaacta
tctgtgaagcactcattacactcaggattgggtttagaggcttatttaagagtaacaagc
ccgatgagacgctatctagatttactagttcagcaacaattggttagatttcttaataag
agtgatctattgaatgatagtgatattaaagagagaattaaagtggtcaatgcttcagtt
tcaaaagtcaataaagccacaagacagagtgttgagcacttcagatgcctttatttcaaa
caaaataaacaatgggaaggagagggggttattgttgaagttaaaggccaaaaggcttct
gtattaattcctgagcttgcaatgattactcaagtcaaattcaaatcaaaagttgagtta
gaagaagagattaagctgaaggttatttcaagtaatttgtttgagagatcaattgatttc
aagccactctaa
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