Candidatus Pseudothioglobus singularis: W908_07400
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Entry
W908_07400 CDS
T04071
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
tsn
Candidatus Pseudothioglobus singularis
Pathway
tsn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
W908_07400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsn03400
]
W908_07400
Enzymes [BR:
tsn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
W908_07400
DNA repair and recombination proteins [BR:
tsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
W908_07400
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
W908_07400
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
W908_07400
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_C
RNase_T
ExoI_SH3
Motif
Other DBs
NCBI-ProteinID:
ALE02359
UniProt:
A0A0M4LQM3
LinkDB
All DBs
Position
1447013..1448440
Genome browser
AA seq
475 aa
AA seq
DB search
MKTFYWYDYETFGLSPKVQRIAQFAGIRTDENLNVLDEHMFYCKPTHDSLPAPEACAVTG
ITPQLCEKKGLIEHEFIKKIHDEFSKPGTCIVGYNSIAFDDEYTRHTLFRNFLDPYSWHW
QNGNARWDILNVARFCYAHKEEGSLNWVKNERNRPIFKLDRLAPANHIEHTNAHDAMADV
RATIGIARIIKDTQPKFFNYALSLNDKKEVAQLVKPLHPMLLTSSSFGYKSSFTRLVTSI
CNHPEYNDRSIVFNLNQDPEIFLELESEELKTLTFSKKSDLPKGIEKLDLSELVYNKSPM
FVCSPNSDNFKLSPILIEKFELNLDKCLKNLRFIQHNSQSIEDKVRAIYRNDSDREPSRD
VDQSLYDGFISNNDRQICNEIQNLSPTQLSEFVPEFEDRRLTKLFLNFKARNYPQLLNEF
EQEQWFEIVQSRIQSGANGFLSIDSFERSIESLRETQPRRENLWKELEDYAQSFI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaagacattttactggtacgactacgaaacctttggcctttcgccaaaagtccaaaga
attgctcaatttgcaggaataagaacagatgaaaatctaaatgttctagacgagcatatg
ttttactgtaaacccactcatgactctcttccagctcctgaagcttgcgcagttacaggt
atcacacctcagctgtgtgaaaaaaaaggcttaattgagcatgagtttataaagaaaatt
catgatgaattctctaaacctggtacctgcattgttggatacaactcaattgcatttgat
gatgaatatacaaggcacactcttttcagaaacttcttagatccttactcttggcattgg
caaaatggcaatgcaagatgggacatacttaatgtggcaagattttgctatgcacataaa
gaagagggaagccttaattgggttaaaaatgaaagaaatagacctatctttaaacttgat
aggctagctcctgctaatcacattgaacatactaatgctcacgatgcaatggctgatgtt
agagctactattggtattgcaaggattatcaaagatacgcagccaaagttttttaattac
gcgttaagcctcaatgataaaaaagaagtcgctcaactggtaaagcctctacaccctatg
cttttaacatcttcatcttttggctataagtcatcatttacaagactcgttacttcaatt
tgtaatcatcctgaatacaatgatcgttcgattgtctttaatttgaatcaagaccctgag
atttttttagagcttgagtctgaagaattaaaaacattaacgttttccaaaaaatcagac
ctacctaaaggcattgaaaagcttgatctcagtgagttggtctataacaaaagcccaatg
tttgtatgtagtccaaactcagataactttaaactatcgccaattttgattgagaaattt
gaattaaacttagacaagtgtctgaaaaatttacgatttattcagcataatagccaaagt
attgaagataaagtgcgtgcaatttacagaaacgactctgatagggagccaagcagagat
gttgatcagtcactatatgatggttttataagtaataatgatcgacaaatttgcaatgag
attcaaaatttatcaccaactcaactatctgaatttgtcccagaatttgaagatagaaga
ctgaccaagttatttttaaactttaaagcaagaaattatcctcagctactcaatgaattt
gaacaagaacagtggtttgaaatagttcaatccagaattcagagtggtgcaaatggattt
ctttcaattgatagctttgaaagaagcatagaaagcctcagagagactcagcctagaagg
gaaaacctttggaaagagctagaagactatgcacaatcatttatctaa
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