Candidatus Pseudothioglobus singularis: W908_07825
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Entry
W908_07825 CDS
T04071
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
tsn
Candidatus Pseudothioglobus singularis
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsn03016
]
W908_07825 (trmE)
Transfer RNA biogenesis [BR:
tsn03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
W908_07825 (trmE)
Prokaryotic type
Methyltransferases
W908_07825 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
AIG1
Ras
MCM
RsgA_GTPase
ABC_tran
Roc
MMR_HSR1_Xtn
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ALE02431
UniProt:
A0A0M3T295
LinkDB
All DBs
Position
complement(1528523..1529866)
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AA seq
447 aa
AA seq
DB search
MIHKSDTICALATAYGQSGIGVIRVTGPLSKSISKKILHQDLQPRYAYYGSFFDNDNNLI
DKGVAIAFPGPNSYTGEDVVEFQGHGGVSVIRKLLATIISLDVRVAEPGEFTKRAFLNGK
MDLVQAEAVQDLIQSSSEESALSAVRSLTGEFSEKINQILSELISLRVFVEATIDFSDEE
IDFLESHEVSSKLQDLKVTLLNILESANQGAILRDGIHVAIAGKPNAGKSSLLNSLTKQP
SAIVTDVAGTTRDVLKETIQIDGMPIHIIDTAGLHNSDNIIEQEGIRRAHTEINNADVVL
LVYDASDKSVDLSILPESVKDKPKIVIKNKIDLTGSKTGIQNIQNNPEISISAKNGDGIN
IVRKALADFAGLNSNTEGVFLARKRHIIAINETLSFINSAISQLDGGASELVAEDLRQAG
MHLGQITGEFSSDDLLGQIFSSFCIGK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgatacataagtcagataccatatgtgcactggcaactgcttatggccaaagtggaatt
ggtgtcattagggtgactggacctctttcaaagtctatttcaaaaaaaatacttcatcaa
gatttgcagcccaggtatgcctattatggctcattctttgataacgacaataacctaatt
gataaaggagtagcgattgcctttcctggtcccaattcttatactggagaagatgtggtt
gagtttcaggggcatggaggagtcagcgttattagaaagctcttagcgaccatcatttca
ctggatgttagggttgctgaaccaggtgaatttactaagagggcgttcttaaatggcaaa
atggatctagtgcaagctgaagcagttcaagatttgattcaatccagctctgaagaatct
gcattaagtgcagtgaggtcattaactggagagttttcagaaaaaatcaatcaaatactt
tcagagttaatctcattaagagtttttgtggaggctactattgatttttctgatgaagaa
attgattttttagagtctcatgaagtttcaagcaagcttcaagatctaaaagtaacgctt
ttaaatatcctagaaagtgcaaatcaaggcgcaattttaagagatggaattcatgtggca
attgcgggtaaaccaaatgcgggtaaatccagtttactgaattccctcacaaaacagcct
agtgctattgtcaccgatgttgctggcaccacaagagatgttctaaaggaaacaatccaa
atagatggaatgcctattcatattatcgatactgctggcctgcacaatagtgacaatata
attgagcaagagggaattaggagagcacataccgaaattaataatgcagatgttgttttg
cttgtttatgatgcaagtgataagtccgttgatctatctatactgccagaatcagttaaa
gacaaaccaaaaatcgtaatcaaaaataagattgatttaacaggctctaaaactgggatt
caaaatattcaaaacaacccagaaatatctatctcagcaaaaaatggagatggaattaat
atagttagaaaagcccttgcagattttgccggactaaattcaaatactgagggcgtcttt
ctggctcgcaaaaggcatatcattgccattaatgaaaccctctcgtttattaatagtgcc
atcagtcaactggatggaggagcaagcgaactggttgctgaagatcttcgtcaggcagga
atgcatcttggtcaaataactggtgagttttcatcagacgatctattgggtcaaatcttc
tcttcattctgtattggcaaatag
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