Candidatus Pseudothioglobus singularis: W908_07960
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Entry
W908_07960 CDS
T04071
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tsn
Candidatus Pseudothioglobus singularis
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsn03400
]
W908_07960
Enzymes [BR:
tsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
W908_07960
DNA repair and recombination proteins [BR:
tsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
W908_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALE02456
UniProt:
A0A0M4LGG6
LinkDB
All DBs
Position
complement(1557835..1561011)
Genome browser
AA seq
1058 aa
AA seq
DB search
MNDQKQRDQALNIESSFIVQAPAGSGKTELITQRYLKLLGSSEEPENILVMTFTNRAVDE
LKLRIVSALSDAQVEPPKEPHKLITYNLALRVLNQSKKRNWDLLRHPSRLKVITIDSLSN
LIVSRFPSLDQLIPHRTIIDSYEYEFIYRQAAENTLLLINDDEYKSSVSSVLLSLDNHVD
RFYRLIEEMLAKREQWLPRLFIDGALDISSLESISKTLITDYLEDLRGIAQNALGDNFFS
LLKVSKREDISQISKLPGSSIKDLKDWRAIADILITKSSKNWRKKIDVTIGFPAEMKDEK
NQLRKFIDGLYSEFELKKLLINLHNLPSEHFPEFTKKYITDIAQVLKLSVAELKVIFDEK
GLQDFSEVSLQAINALDTREELTDIALLLDYQIKHVLVDEFQDTSYSQLNLIQKLVEGWQ
QDDGKTIFFVGDPMQSIYKFRESQVGIFLEVVRSGIANLDIKPLILSTNFRSTQSIVREN
NEIFANIFPNEDNLILGSIHYSKSTPFSKEEQKNAISFYVFSPNQDQEEAEEIVKIIQQS
LLRNQEKEIAVLVRSRSHLSQVSSALQKNNINFESLKTESLRSNLFTRDLLSLTRALLSL
SDKLAWLSILRAPWCGLKLKDLLALSKTSDQTIFNQLMNVESVQNLSDDGIKRAQHIFLA
TKEAIFSEGKFTFVERFSFVLEMLYKDHYLEEQEKNIKTQFLKLLNHCESNQVLNIKTIE
SMLQDLYAPSRSSNLKLMTIHQAKGLEFDIVIIPGLGKKGRNDNLPLMQMQEFSDNHVLL
APIKPTDEDSESETYLYLQYLKKQQSHFELMRLLYVAMSRAKQEVHLLGALSKSGKPTTG
SFLSLLSDYYEDNVIHINSQNESSLEIEQPPKLLRNKILMPPLVRKQNYVDDLNNSPKAF
DLIYQGALGTIVHFYLEHAEFNPSSLSVDTMLRERGVPSRLLNSLSDTILSLLKNTKRDK
NFEWIFKYRESTEVESEFSNSTQTIIVDRLFVEDGVLWIIDFKTSSLHEGENINAFIERQ
KNAHQGQIENYKGVLEEFFQLPSKSALYCPAASQLIFL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgatcaaaaacaaagagaccaagcgttaaatattgagagctcatttattgttcaa
gccccagcgggctctggaaagactgaacttatcacgcaaagatatttaaaattattgggc
tcttctgaagaaccagaaaatatcttagttatgacattcactaatagggcagtcgatgag
ttaaagctccgaattgtaagtgctttaagtgatgcacaagtggagccacctaaggagcct
cataaacttataacctataatcttgctttacgggttttaaatcaatcaaagaaaagaaac
tgggaccttcttaggcacccttcacggctgaaagtcattaccattgattcattatctaat
ttgatagtttcaaggttcccatctcttgatcaattgattccccacagaacaatcatcgac
tcctatgagtacgaatttatttatcgtcaggccgcagaaaatactttgctattgatcaat
gatgatgaatataaatcaagcgtttcctcagtcttactatctcttgataatcatgttgat
agattttatcgcctcatagaggagatgcttgctaaaagagaacaatggctaccaaggcta
ttcattgatggcgctttagatatcagctcactggagagcatctcaaaaacattaataact
gactatctagaagatcttcgaggtattgctcaaaatgctcttggagataatttttttagt
ctgttaaaggttagcaagagggaagatatctcacagatttcaaaactccctgggtcaagt
attaaagacttaaaggattggagggctattgctgatattctgattacaaaaagttcaaaa
aactggagaaagaaaattgatgtaactattggcttcccagctgaaatgaaagatgaaaaa
aatcagttaagaaaatttattgatggcctatattctgagtttgagcttaaaaaattgctc
attaatttacataatttacccagtgaacactttcctgaatttacaaaaaaatatattact
gacatagcacaggtactaaagttgagcgttgcagagcttaaagttatttttgatgaaaaa
ggccttcaagatttctctgaagtcagtttgcaggcgataaatgcgcttgatactcgagag
gaattaactgacatcgctttgttactagactatcaaattaaacatgtccttgtagacgag
tttcaagatacttcttattcacaattaaatttaattcaaaagcttgtcgaaggttggcag
caggatgacggtaaaaccattttttttgttggtgacccaatgcagtctatctataagttt
agagagtcacaagttggaatatttcttgaggtcgtcagaagtggtattgcgaaccttgac
attaaacccctcattttaagtactaactttagatcaactcaaagtattgttagagaaaat
aatgagatttttgctaacatctttccaaatgaagataatttaattcttggttctattcat
tactcaaaatcgactccattttcgaaagaagagcaaaaaaatgctatatccttttatgta
tttagtccaaatcaggatcaagaagaggcagaagagatagtaaaaattattcaacaatct
cttcttagaaatcaagagaaagaaatagctgttcttgtcagatcaagatctcatttaagc
caagtgagttcagcgcttcaaaaaaataatataaattttgaatcattaaagactgagtcc
cttcgatcgaatctttttactagggatttattaagtttaacaagggctcttcttagtttg
agcgataagctagcatggctttcaatcctcagggctccatggtgtggcctgaaactaaaa
gacttattggcgcttagtaagacatcagatcaaaccatttttaatcaattaatgaatgta
gagtcagttcaaaatctgagtgatgatgggatcaaaagggcacaacacattttcctggct
acaaaagaagccattttttctgagggtaaatttacctttgttgagcgcttttcatttgta
ttagaaatgctttataaagaccattatttagaagagcaagaaaaaaatattaaaactcag
tttcttaaactacttaatcattgtgagtcgaatcaagttttgaatatcaaaacgattgag
tcaatgcttcaagatttatatgcaccatcaagaagttcaaatttgaaattgatgactatc
caccaagccaagggtttggaatttgatatagtcattattcctggtttaggcaaaaagggc
aggaatgacaaccttccattaatgcaaatgcaagagttttcagataatcatgttttattg
gctcccataaagccgacagatgaagatagcgagagtgagacatatctatacttgcagtat
ttaaagaagcaacaatcacactttgagttaatgaggctcctttatgttgcaatgagtagg
gccaaacaagaagtccatttattaggcgctctatcaaaaagtggaaagcctacaactggt
tcatttctatcattattgagtgactactatgaggacaatgtcattcatatcaatagtcaa
aatgagtctagtttagaaatagaacaacctccaaaactcctgcgcaacaaaatcttaatg
ccacctctggttagaaagcaaaactatgtagatgatttaaacaactctccaaaagcattt
gatttaatttatcaaggtgctctgggtactattgttcacttctatctagagcacgctgaa
tttaatccatcatcgctaagtgttgatacaatgcttagagagaggggagtgccatcaaga
ttactcaattctttgtctgatacaattttaagcctcctaaaaaataccaagcgtgataaa
aactttgagtggatttttaagtatagagagtcaacagaagttgagtcagaatttagtaac
tcaacccaaacgattattgttgatcgattatttgttgaggatggagttttgtggattata
gactttaagacctcctctcttcatgaaggtgaaaatattaatgcatttattgagaggcaa
aaaaatgctcaccaggggcaaattgaaaactacaagggcgttcttgaagagttttttcag
cttccatcaaaatcggcactctattgtccagcagccagccagttaatatttctataa
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