Candidatus Pseudothioglobus singularis: W908_07970
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Entry
W908_07970 CDS
T04071
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tsn
Candidatus Pseudothioglobus singularis
Pathway
tsn03030
DNA replication
tsn03410
Base excision repair
tsn03420
Nucleotide excision repair
tsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
W908_07970
03410 Base excision repair
W908_07970
03420 Nucleotide excision repair
W908_07970
03440 Homologous recombination
W908_07970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsn03032
]
W908_07970
03400 DNA repair and recombination proteins [BR:
tsn03400
]
W908_07970
Enzymes [BR:
tsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
W908_07970
DNA replication proteins [BR:
tsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
W908_07970
DNA repair and recombination proteins [BR:
tsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
W908_07970
NER (nucleotide excision repair)
GGR (global genome repair) factors
W908_07970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ALE02458
UniProt:
A0A0M4L555
LinkDB
All DBs
Position
complement(1562864..1565596)
Genome browser
AA seq
910 aa
AA seq
DB search
MAHPLILVDGSAFLFRSYFSTISQNLTNDSGFPTGAMFGVVNAIKHLQRKYQGAKLIMVF
DAKGSNFRHQMFPDYKANRSPAHDDLIIQIEPLYKIIRAMGFHFLCVEGVEADDVIATLS
RFAAQSDIETIIASGDKDLFQLVGGNIKQLDMKGKLYSEADVKEKMGVNPNQILDLLALT
GDSADNIPGVPSVGPKTASKWLEQYSNIEGVKANAEKIGGKVGEKLRESFDLLDLSYQLV
QLKFDVQLPFDILEEEPGENTEELIALYKEFGFSMWLKQLDEKNETVQINSQEKEIPESP
NTDAKISMDDYTKSLVLTEDEFTLLLSKLSSSKSFVFDLETNSLDYMEAEIVGFVFLIEK
SSYYVPVAHDYLDAPVQLPRYMVLNSLKSILESEVIGKIGQNLKYDAHVLANVDIELNGI
VDDTMLKSYCLDSVASRHNMDDLALHYLDHTTIHYSDVAGSGKKQLTFNQVSIDEAMPYA
CEDVIVTNELNNLLELKLQSFPKLVALYKSIEIPLIKVMLRLERNGALLDETSLFNQQVE
IKAEMASIQSKAFEVAGDEFNLESPKQIQQILFSEEGFGLEPKKKTAKGQPSTNEEALKL
LDHPLVDLILSYRTLTKLNSTYLEALPKQINRRTGRLHTSYHQAVTATGRLSSSKPNFQN
IPIRTEQGAQIRSAFIANKGSIILAADYSQIELRIMAHISEDKNLLTAFNNNEDVHRSTA
SQVFDTEISKVTKDQRRKAKAINFGLIYGMSAFGLAKQIDVSRTEAKQYIDGYFENYPGV
LQFMNETKEKAKSQGYVETVLGRRLYLPQINSKNKMLQQHALRTAINAPMQGSSADIIKK
AMLNIQDWIDSEGHEIKMFMQVHDELVFEINSEKADEYANKIKLMMSNALKLHIPLEVDI
GIGSNWQEAH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcccacccactcattttagttgacggttcagcgtttttatttcgctcatacttttca
actatatctcagaatttaaccaatgatagtggttttcctactggagcaatgtttggcgtc
gtgaatgccattaagcacctacaaagaaagtaccaaggagcaaaactcataatggtattt
gatgcgaaagggtccaattttcgccatcaaatgtttcctgactataaggcaaatagaagt
cccgctcatgatgacttaattattcagatagagcctctatataaaattattcgcgctatg
ggtttccatttcttatgtgttgaaggtgttgaggccgatgatgtcattgctacattgtca
agatttgcagctcaaagtgatattgagacaatcattgcaagcggtgataaagacctcttc
cagcttgtcggtggaaatattaagcaactagatatgaaagggaaattatatagtgaagct
gatgtcaaagaaaaaatgggagttaatcctaatcaaattttagatctgctcgctttaaca
ggtgattctgcagacaatattcccggtgtgccgagtgttgggcctaagactgcatctaaa
tggcttgagcaatattctaatattgaaggagtcaaagccaatgctgagaagattggtggt
aaggtaggtgaaaaacttagggaatcttttgatttattagacctctcttatcaattagtt
caacttaagtttgatgttcagctgccttttgatattttagaagaggagcctggagaaaat
acagaagaattaattgccctatacaaagagtttggcttctctatgtggttaaagcagtta
gatgaaaagaatgagactgttcaaattaattcacaagaaaaagagataccagaatctcca
aacactgatgccaaaatatcgatggatgactatactaaatcgttagtgctcactgaagat
gaatttacattgttattatcgaagttatcctctagcaagtcctttgtatttgatcttgag
acaaatagtcttgactatatggaggccgaaatcgttggattcgttttccttattgaaaag
agcagttattacgtcccagtggcccatgattatttggatgctccagtgcagcttccaaga
tatatggtattgaattctctcaagtcaattttagaaagtgaggtaataggcaaaattggt
cagaacttaaagtatgatgcccatgttttagctaatgtcgacatagagctcaatggaatt
gttgatgacacaatgcttaaatcttattgcttggattcagtagcaagtcgccacaacatg
gatgacttggcgctgcattatttagatcacactacaatccattattcagatgtagctgga
agcggtaaaaaacaattaacctttaatcaggtcagtattgatgaggcaatgccatatgcc
tgtgaggatgtaattgtgacaaatgaacttaataatttacttgagctaaaacttcaatcc
tttcctaagcttgtagcgttgtacaagagtattgaaattccattaattaaggtcatgctc
agactggaaaggaacggtgcacttttagatgagacatctctttttaatcagcaagttgaa
ataaaggctgagatggctagcattcaatcaaaggcatttgaagtagcaggtgatgagttt
aatctggagtcgcctaagcaaatacaacaaatattatttagtgaggagggttttgggctt
gagccaaaaaagaaaacagccaaaggccaaccatccacaaatgaagaagcattaaagttg
ttagatcatcccttagttgacttaattctttcctatagaactctgacaaagttaaattct
acatatctagaagcacttcctaaacagatcaatagaagaacaggtcgactgcatacctca
tatcatcaggctgtaaccgcaactggccgactttcatcatcaaagcctaattttcaaaat
atcccaataagaaccgaacagggtgctcaaattaggtccgcttttatcgctaataaggga
agcattattcttgctgccgattactctcaaattgaattgaggattatggcccatatctca
gaggataaaaacttactcactgcctttaataataatgaagatgtccaccgatcaaccgct
tctcaggtttttgatacagaaatttctaaggtgactaaagatcagcgtcgaaaggctaaa
gccattaattttggcctaatttatggaatgagtgcatttggtttagctaaacaaatcgat
gtttcaaggacggaagccaaacaatatatagatggctactttgaaaattatcctggtgtc
cttcaatttatgaatgagacaaaagagaaagcgaaatctcagggatatgttgagacagta
ttaggtaggaggctttatttgcctcaaattaattctaaaaataaaatgcttcagcagcat
gcattgaggactgctattaatgctcctatgcaagggtcatctgctgatattatcaaaaaa
gcaatgcttaatattcaggattggattgattcagaaggccatgagatcaagatgtttatg
caagtgcatgatgagttagtatttgagatcaactctgaaaaggctgatgagtatgcaaat
aaaataaaattaatgatgtcgaatgctttaaagctgcacatcccccttgaggttgatatt
ggtattggatcaaattggcaagaggctcattag
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