Candidatus Pseudothioglobus singularis: W908_08430
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Entry
W908_08430 CDS
T04071
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tsn
Candidatus Pseudothioglobus singularis
Brite
KEGG Orthology (KO) [BR:
tsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsn03016
]
W908_08430
Enzymes [BR:
tsn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
W908_08430
Transfer RNA biogenesis [BR:
tsn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
W908_08430
Prokaryotic type
W908_08430
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
UPF0113
Motif
Other DBs
NCBI-ProteinID:
ALE02528
UniProt:
A0A0M5KS36
LinkDB
All DBs
Position
complement(1649391..1650305)
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AA seq
304 aa
AA seq
DB search
MSRRNKKGRDINGVLLLDKASGCSSNSALQDVKYLFNANKAGHTGSLDPLASGLLPICFG
QATKIAQFLLDGDKRYFVRGKLGQVSNTGDSEGELSEYGSTKDVDDATIKSTLLNLIGSI
KQIPPMYSALKREGTPLYKLARKGIEVEREAREVSIHEILFKDFDADILTLEVSCSKGTY
IRTLIEDIGKLLGCGGYVIELRRIGFAHFDIAQGKTFEELEILKGDSLSNIDPVLIGADK
MLPTVNSVYLNLEQSIDIKFGRKITFPGLDSDQKVKLYDENKEFIGIGQSNNLSEVLPKR
LFIN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgtctagacgcaataaaaaaggtagagacattaacggagttttgcttttagataaagcg
agtggttgtagttctaattcagccttgcaagatgtgaaatacctatttaatgccaataaa
gcaggccacactggtagccttgaccccttggcgagtggtcttcttccgatttgttttggc
caggcaacaaagattgcacagtttttactcgatggagataagcgatattttgttagggga
aaattaggtcaagtcagcaacactggtgactctgagggagaactgtctgagtatggttca
actaaagatgttgacgatgccactatcaaaagcacactgctcaatcttattggtagcatt
aagcaaataccaccaatgtactctgcacttaagagagaaggaacacctctatataaactt
gctagaaagggtattgaggttgaaagagaagcaagagaagtcagtattcatgaaatcctt
tttaaggattttgatgcagatatattaactcttgaagtgtcatgttcaaagggcacctat
attagaacacttatcgaggatattggtaaattattaggctgtggtggctatgtgattgag
cttaggaggatcgggtttgctcactttgacattgcccagggaaaaacgtttgaagagctg
gagattctcaaaggagatagcttatctaatatagatcctgttctgattggagcagataaa
atgctcccaactgtaaatagtgtttatttaaatttggagcagtcaattgacattaagttt
ggaagaaaaataacctttcctggcttagatagcgatcaaaaagttaagctttatgatgag
aataaagaatttatcggaattggccaaagcaacaacttatccgaggttttaccaaaaagg
ctttttataaattag
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