Terrihabitans soli: IZ6_00560
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Entry
IZ6_00560 CDS
T07468
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tso
Terrihabitans soli
Pathway
tso03030
DNA replication
tso03430
Mismatch repair
tso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IZ6_00560 (dnaQ)
03430 Mismatch repair
IZ6_00560 (dnaQ)
03440 Homologous recombination
IZ6_00560 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tso03032
]
IZ6_00560 (dnaQ)
03400 DNA repair and recombination proteins [BR:
tso03400
]
IZ6_00560 (dnaQ)
Enzymes [BR:
tso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IZ6_00560 (dnaQ)
DNA replication proteins [BR:
tso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IZ6_00560 (dnaQ)
DNA repair and recombination proteins [BR:
tso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IZ6_00560 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DUF3660
Motif
Other DBs
NCBI-ProteinID:
BCJ89321
UniProt:
A0A6S6QQG8
LinkDB
All DBs
Position
56466..57176
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AA seq
236 aa
AA seq
DB search
MREIIFDTETTGLDPLNGDRVVEIGCIETVNLIATGNTFHVYINPERDMPEGAFRVHGLS
AEFLAQHKKFAEIADEFVAFIGEDSKLVAHNGTFDIGFLNAELDRCGKPIIARERLIDTL
VLARRRHGFASNKLDDLCARYGIDNSRRTKHGALLDAELLAEVYAELMGGRQASFGLAVA
DAPRARRGEEIAIAVRPEPLAPRLTSEDVEAHRSFIGNLGEAALWWSYEPQTAPAE
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcattttcgacaccgaaacgacgggcctcgacccgctcaacggcgaccgc
gtcgtcgagatcggctgcatcgaaacggtcaacctcatcgcgaccggcaacaccttccac
gtctacatcaatcccgaacgcgacatgccggaaggcgcgttccgtgtgcatggcctctcg
gcggagtttcttgcccagcacaagaaattcgcggaaatcgccgatgaattcgtcgctttt
atcggcgaggattcaaaactcgtggcgcataacggcacattcgatatcggctttttgaac
gccgagctcgaccgttgcggcaagcccattatcgcgcgcgagcgcctgatcgacacgctc
gttctcgcccgccgccgtcacggctttgcgtcgaacaagctcgatgatctctgcgcccgc
tacggcatcgacaattcgcgccgcaccaagcacggcgctctcctcgacgccgaacttctc
gccgaggtctatgcggaattgatgggcggccgtcaggcgagcttcggcttggccgttgcc
gatgcgccgcgcgcccgccgcggcgaagagattgccattgccgtccgccccgagccgttg
gcgccgcgcctgacatcggaagatgtcgaagcgcatcgcagctttatcggcaatctcggt
gaagcggccctgtggtggtcctacgaaccgcagaccgccccggccgaataa
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