Terrihabitans soli: IZ6_08180
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Entry
IZ6_08180 CDS
T07468
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tso
Terrihabitans soli
Pathway
tso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IZ6_08180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tso03400
]
IZ6_08180
Enzymes [BR:
tso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
IZ6_08180
DNA repair and recombination proteins [BR:
tso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IZ6_08180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
BCJ90083
UniProt:
A0A6S6QG47
LinkDB
All DBs
Position
779379..780737
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AA seq
452 aa
AA seq
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MLAGVPPWQVVFSFKDTPDLFGSDLPPPEAEGTFRVSRRFLDLAAAASLHSDPERFALLY
RILWRLRSQPALLDLSTDADIARANDMAKNVRRDIHKMHAFVRFREMPAGEGERMVAWFE
PEHHIIEAGAPFFARRFPNMLWSILSPEVSAHWNGDDLSFGPGAGRKDAPEHDRLEEMWK
AYYASIFNPARLKPNAMRSEMPEKYWNNLPEAELIAPLMAEARKRTEDMVRRGATAPKAN
RQTPIPARVPSIPVAGDALDALREKARGCRMCPLWKPATQTVFGEGPQEAEIMFVGEQPG
DKEDLAGHPFIGPAGQLFDRALGEAGLDRSSAYITNAVKHFKFTPRGKIRLHQKPNTTEI
RACRPWLDQELDIVKPKLVIALGATAAQSLFGRAMPIGPNRGQFLRAGDARALITVHPSY
LLRVPEEERKAEEYARFVEDLKLAHLVLKKAA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgctggccggtgtgccgccttggcaggtcgtcttctcattcaaggacacgcccgatctc
ttcgggtccgacctgccgccgccggaggcggaaggcacgttccgcgtctcgcgccgcttc
ctcgatctggccgccgcggcgtcgctccattccgatccggaacgctttgcgctgctctac
cgcatcctctggcgcctgaggtcgcagcccgctctgctcgatctctcgaccgatgccgac
atcgcccgcgccaatgacatggccaaaaatgtccgccgggacattcacaaaatgcacgcc
tttgttcgcttccgggaaatgccggcgggcgagggcgagcgcatggtcgcctggttcgag
cccgagcatcacatcatcgaagcgggcgcgccgttcttcgcccgccgcttcccgaacatg
ctgtggtcgatcctgtcgcccgaagtcagcgcccattggaacggcgatgacctctctttc
ggcccgggcgccgggcgcaaagacgccccggagcatgaccggctggaggagatgtggaag
gcctattacgcctcgatcttcaatccggcgcggctgaagcccaatgccatgcgctccgaa
atgccggagaagtattggaacaacctgcctgaggcggagctgattgcgccgctgatggct
gaggcccgcaagagaaccgaagacatggtgaggcgcggtgcaacggcgccgaaagccaac
cgccagactccgatccccgcgcgcgtgccttccatccctgtggcgggcgatgcgctcgat
gccttgcgcgagaaggcgcgcggctgccgcatgtgcccgctctggaaaccggcgacacag
accgtcttcggcgaaggaccgcaggaagccgagatcatgtttgtcggcgagcagccgggc
gataaggaagatctcgccggtcatccctttatcggcccggcgggccagcttttcgatcgt
gcgcttggggaggcggggctcgaccgttcaagtgcctacatcaccaatgcggtgaagcat
ttcaaattcaccccgcgcggcaagatccgcctgcatcagaaacccaacaccaccgaaatc
cgcgcctgccgtccctggctcgatcaggaactcgatatcgtaaagccgaaactcgtcatc
gcgctgggagcgaccgcggcgcagagcctgttcggccgcgccatgccgatcggcccaaac
cgcggccagtttctgcgggcgggcgatgcgcgggcgctcatcaccgtgcatccgtcctat
ctgctgcgcgtgccggaagaggagaggaaggccgaggaatatgcgcgcttcgtcgaggat
ttgaagctcgcgcatctcgtgctgaagaaagccgcctga
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