Terrihabitans soli: IZ6_16100
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Entry
IZ6_16100 CDS
T07468
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
tso
Terrihabitans soli
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tso03016
]
IZ6_16100 (rnd)
Enzymes [BR:
tso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
IZ6_16100 (rnd)
Transfer RNA biogenesis [BR:
tso03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IZ6_16100 (rnd)
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BCJ90875
UniProt:
A0A6S6QTE6
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Position
complement(1548903..1550093)
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AA seq
396 aa
AA seq
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MVVRGPRVGYMAGMILTSTEDLKAACQRLAKSDFVTVDTEFLRETTFWPKLCVIQLADDD
EAFAVDALAPGIDLKPLFDLMANEKVLKVFHAGRQDIEIMWHLAKLIPHPVFDTQIAAMV
LGYGESISYDQLVQRITGTQLDKSSRFTDWSRRPLSEAQITYALADVTHLRPVYRRLAED
LEKRGRAAWVFEEMEILTSADTYRQAPEDAWKRIKARLRKPKEIGVLMEIAAWRENEAQT
RDVPRSRIIKDEILAEIALRSPATVEALGSLRGLPNGFERSKAGTEIVAAVKRGLAKDPA
TLPRIERDRPPPNGAGATVELLRVLLKMISEKEGVAPKILATTDDLEQIAASDEADVPAL
HGWRRELFGEKALGLKRGEIALGLRKGRVSAVEVKS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgcgcgggccccgagtcggttatatggcgggcatgatcctgaccagtactgag
gatttgaaggccgcctgccagcggctggctaaatccgattttgtcaccgtcgacaccgaa
ttcctccgcgaaacgaccttctggccgaaactctgcgtcatccagcttgccgatgacgat
gaggcctttgccgtcgacgccctggcccccggcatcgatctgaagcccctcttcgacctt
atggcgaacgagaaggtgctgaaggtcttccatgccggccgccaggacatcgaaatcatg
tggcatctggccaagctgatcccgcatccggtcttcgacacgcagatcgccgcgatggtg
ctcggctatggcgagagcatttcctacgatcagctcgtccagcgcattaccggcacccag
ctcgacaagtcttcgcgcttcaccgactggagccgccgccccttgagcgaggcccagatc
acttatgcgctggcggacgtcacgcatctgcgtccggtctatcgccgtcttgccgaagat
cttgagaagcgcggccgcgccgcctgggtgttcgaggaaatggaaatcctgacctcggcc
gacacttatcgtcaggcgccggaggatgcgtggaagcgcatcaaggcgcgcctccgcaag
ccgaaagaaatcggcgtgctgatggagatcgccgcctggcgcgaaaacgaagcgcagacg
cgcgatgtgccgcgctcgcgcatcatcaaggacgagatcctcgccgagatcgcattgcgc
agtcccgcgactgttgaggcgctcggctcgctgcgcggactgcccaatggtttcgagcgc
tcgaaggccggcacggaaatcgttgctgctgtgaagcgcggcttggcgaaagatcccgcc
accctgccccgcatcgaacgcgaccgtccgccgccgaacggcgcgggcgcgaccgtcgaa
ctgctccgcgttcttctgaagatgatttcggagaaggaaggcgtcgcgccgaaaattctc
gcgaccaccgacgatctcgaacagatcgccgcgagcgatgaggcggatgtgccggcgctg
cacggctggcggcgcgaactgttcggcgaaaaggcgctcggcctcaagcgcggcgaaatc
gcgctcgggcttcgcaaaggccgcgtcagtgcggtcgaggtgaagagctaa
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